CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018812.1-P	Field mustard	nucleus	99.4	100.0
CDY28100	Canola	nucleus	68.07	61.08
GSMUA_Achr9P27040_001	Banana	cytosol, mitochondrion, nucleus	19.88	55.93
GSMUA_Achr10P...	Banana	cytosol	14.46	41.38
TraesCS5A01G240600.1	Wheat	plastid	19.28	35.96
AT1G49620.3	Thale cress	nucleus	40.36	33.5
EER99015	Sorghum	plastid	15.66	30.59
KRH76992	Soybean	nucleus, plastid	33.73	28.28
TraesCS5D01G247100.1	Wheat	plastid	21.08	26.72
CDX92305	Canola	nucleus	28.31	26.7
KRH28480	Soybean	plastid	32.53	26.34
CDX99264	Canola	nucleus	27.71	26.14
KRH04631	Soybean	plastid	25.9	25.6
CDY22987	Canola	nucleus	29.52	25.52
VIT_07s0031g00800.t01	Wine grape	plastid	32.53	25.47
KRH57804	Soybean	plastid	27.71	25.0
Solyc01g108610.2.1	Tomato	nucleus	32.53	24.77
CDX82309	Canola	nucleus	28.31	24.61
PGSC0003DMT400066394	Potato	nucleus	28.31	24.48
HORVU5Hr1G068770.6	Barley	nucleus	21.69	23.08
VIT_03s0063g00670.t01	Wine grape	nucleus	30.12	22.83
KRH71159	Soybean	nucleus, plastid	24.1	22.73
KRH50258	Soybean	nucleus, plastid	24.7	21.93
TraesCS5B01G238600.1	Wheat	plastid	16.27	21.26
GSMUA_Achr2P22370_001	Banana	nucleus	25.3	20.19
PGSC0003DMT400040785	Potato	nucleus	24.1	18.43
Solyc02g090680.2.1	Tomato	nucleus	22.29	17.45
GSMUA_Achr10P...	Banana	nucleus, plastid	22.89	17.12

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	GO:A0A078IPG7	UniProt:A0A078IPG7	InterPro:CDI	EnsemblPlants:CDY50958
ProteinID:CDY50958	ProteinID:CDY50958.1	GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	EnsemblPlantsGene:GSBRNA2T00097835001
PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF39	UniParc:UPI0004EEF693	SEG:seg

Description

BnaA06g37540DBnaA06g37540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPG7]

Coordinates

chrLK032953:+:9534..10517

Molecular Weight (calculated)

18383.5 Da

IEP (calculated)

4.096

GRAVY (calculated)

-1.006

Length

166 amino acids

Sequence
(BLAST)

001: MNEMSERDSK ETSFEGSSIK RMRLDDGDDS AEETTVSSSS SSSLSYSAAS DSEDEDHRSS SAIDTSLPFL DLEGEQQISE TEVSSLITIS FSRAQGSPSS
101: EMDSATTTKT ERQEKKAKAP PTQAELDDFF SAAERGQQKR FSDKYNYDIV NDTPLEGRYE WVSLKP

Best Arabidopsis Sequence Match ( AT1G49620.3 )
(BLAST)

001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP

Arabidopsis Description

KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.