Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 13.06 | 50.0 |
| GSMUA_Achr9P27040_001 | Banana | cytosol, mitochondrion, nucleus | 11.71 | 44.07 |
| TraesCS5A01G240600.1 | Wheat | plastid | 13.51 | 33.71 |
| EER99015 | Sorghum | plastid | 12.61 | 32.94 |
| KRH04631 | Soybean | plastid | 22.52 | 29.76 |
| GSMUA_Achr2P22370_001 | Banana | nucleus | 27.03 | 28.85 |
| TraesCS5B01G238600.1 | Wheat | plastid | 15.77 | 27.56 |
| VIT_07s0031g00800.t01 | Wine grape | plastid | 26.13 | 27.36 |
| KRH76992 | Soybean | nucleus, plastid | 23.42 | 26.26 |
| KRH57804 | Soybean | plastid | 21.17 | 25.54 |
| TraesCS5D01G247100.1 | Wheat | plastid | 14.86 | 25.19 |
| KRH28480 | Soybean | plastid | 22.07 | 23.9 |
| KRH71159 | Soybean | nucleus, plastid | 18.47 | 23.3 |
| Bra018812.1-P | Field mustard | nucleus | 17.12 | 23.03 |
| CDY50958 | Canola | nucleus | 17.12 | 22.89 |
| HORVU5Hr1G068770.6 | Barley | nucleus | 15.32 | 21.79 |
| CDY28100 | Canola | nucleus | 18.02 | 21.62 |
| KRH50258 | Soybean | nucleus, plastid | 17.57 | 20.86 |
| PGSC0003DMT400040785 | Potato | nucleus | 20.27 | 20.74 |
| AT1G49620.3 | Thale cress | nucleus | 18.47 | 20.5 |
| Solyc02g090680.2.1 | Tomato | nucleus | 19.37 | 20.28 |
| VIT_03s0063g00670.t01 | Wine grape | nucleus | 19.82 | 20.09 |
| PGSC0003DMT400066394 | Potato | nucleus | 16.67 | 19.27 |
| CDX99264 | Canola | nucleus | 14.41 | 18.18 |
| CDX92305 | Canola | nucleus | 14.41 | 18.18 |
| Solyc01g108610.2.1 | Tomato | nucleus | 17.12 | 17.43 |
| AT3G19150.1 | Thale cress | nucleus | 14.86 | 16.84 |
| Bra001736.1-P | Field mustard | nucleus | 13.06 | 16.38 |
| CDX82309 | Canola | nucleus | 13.96 | 16.23 |
| CDY22987 | Canola | nucleus | 13.51 | 15.62 |
| Bra022391.1-P | Field mustard | nucleus | 5.41 | 8.28 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 |
| EnsemblPlantsGene:GSMUA_Achr10G19320_001 | EnsemblPlants:GSMUA_Achr10P19320_001 | EnsemblPlants:GSMUA_Achr10T19320_001 | UniProt:M0RJK7 | PFAM:PF02234 | PIRSF:PIRSF017811 |
| PANTHER:PTHR10265 | PANTHER:PTHR10265:SF23 | UniParc:UPI000294D806 | SEG:seg | : | : |
Description
Putative Cyclin-dependent kinase inhibitor 1;1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G19320_001]
Coordinates
chr10:+:25746712..25748065
Molecular Weight (calculated)
24452.9 Da
IEP (calculated)
8.368
GRAVY (calculated)
-0.412
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKNSRKCGG VGKREVRTRA AQKLALAVAA SSQSPKREKA VVREERQISN LELRNRSVIL KPRIARSTAT SASRRRSCPE LGSIFRCPSD VSCEPAVPAR
101: SAEVSGTTVS SFLASCEAII LTFLSLLGQE LDVTTFYSCN VERGEMMASN NPDEGASDPE SAAERESRRR SMVVATPSET ELEDFFAAAE IDLRRRFTQK
201: YNFDVVEDVP LAGRYDWIPL TP
101: SAEVSGTTVS SFLASCEAII LTFLSLLGQE LDVTTFYSCN VERGEMMASN NPDEGASDPE SAAERESRRR SMVVATPSET ELEDFFAAAE IDLRRRFTQK
201: YNFDVVEDVP LAGRYDWIPL TP
001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
Arabidopsis Description
KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.