Factsheet for Bra001736.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002947.1-P
Bra007086.1-P
Bra007901.1-P	endoplasmic reticulum
Bra007982.1-P
Bra007983.1-P
Bra009031.1-P	nucleus
Bra011501.1-P	nucleus
Bra012909.1-P	nucleus
Bra014802.1-P
Bra016143.1-P
Bra017629.1-P	nucleus
Bra017840.1-P	nucleus
Bra018036.1-P
Bra029917.1-P
Bra029992.1-P	nucleus
Bra034198.1-P	nucleus
Bra034612.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19150.1	Bra007901.1-P	AT1G70210.1	20407024
AT3G19150.1	Bra007982.1-P	AT1G71380.1	20706207
AT3G19150.1	Bra007983.1-P	AT1G71380.1	20706207
AT3G19150.1	Bra016143.1-P	AT1G71380.1	20706207
AT3G19150.1	Bra018036.1-P	AT3G48750.1	11449057
AT3G19150.1	Bra029917.1-P	AT3G48750.1	11449057
AT3G19150.1	Bra012909.1-P	AT3G50070.1	20407024
AT3G19150.1	Bra029992.1-P	AT3G50070.1	20407024
AT3G19150.1	Bra007086.1-P	AT3G54650.1	18948957
AT3G19150.1	Bra014802.1-P	AT3G54650.1	18948957
AT3G19150.1	Bra034198.1-P	AT4G03270.1	20407024
AT3G19150.1	Bra011501.1-P	AT4G34160.1	20407024
AT3G19150.1	Bra017629.1-P	AT4G34160.1	20407024
AT3G19150.1	Bra034612.1-P	AT4G34160.1	20407024
AT3G19150.1	Bra017840.1-P	AT4G37630.1	20407024
AT3G19150.1	Bra009031.1-P	AT5G10440.1	20407024
AT3G19150.1	Bra002947.1-P	AT5G54900.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82309	Canola	nucleus	92.66	85.86
Bra022391.1-P	Field mustard	nucleus	33.33	40.69
AT3G19150.1	Thale cress	nucleus	41.24	37.24
GSMUA_Achr10P...	Banana	cytosol	11.86	36.21
GSMUA_Achr9P27040_001	Banana	cytosol, mitochondrion, nucleus	11.86	35.59
EER99015	Sorghum	plastid	14.69	30.59
KRH71159	Soybean	nucleus, plastid	29.94	30.11
TraesCS5A01G240600.1	Wheat	plastid	14.69	29.21
KRH50258	Soybean	nucleus, plastid	29.38	27.81
Bra018812.1-P	Field mustard	nucleus	24.86	26.67
PGSC0003DMT400066394	Potato	nucleus	28.25	26.04
KRH57804	Soybean	plastid	26.55	25.54
Solyc01g108610.2.1	Tomato	nucleus	31.07	25.23
TraesCS5D01G247100.1	Wheat	plastid	18.08	24.43
TraesCS5B01G238600.1	Wheat	plastid	17.51	24.41
KRH04631	Soybean	plastid	22.6	23.81
KRH76992	Soybean	nucleus, plastid	25.99	23.23
KRH28480	Soybean	plastid	25.99	22.44
VIT_07s0031g00800.t01	Wine grape	plastid	26.55	22.17
VIT_03s0063g00670.t01	Wine grape	nucleus	24.86	20.09
HORVU5Hr1G068770.6	Barley	nucleus	17.51	19.87
GSMUA_Achr2P22370_001	Banana	nucleus	22.6	19.23
PGSC0003DMT400040785	Potato	nucleus	20.9	17.05
Solyc02g090680.2.1	Tomato	nucleus	19.21	16.04
GSMUA_Achr10P...	Banana	nucleus, plastid	16.38	13.06

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EnsemblPlantsGene:Bra001736	EnsemblPlants:Bra001736.1	EnsemblPlants:Bra001736.1-P	InterPro:CDI
GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	UniProt:M4CC06	PFAM:PF02234	PIRSF:PIRSF017811
PANTHER:PTHR10265	PANTHER:PTHR10265:SF30	UniParc:UPI00025404EB	SEG:seg	:	:

Description

AT3G19150 (E=9e-016) KRP6, ICK4 | KRP6 (KIP-RELATED PROTEIN 6); cyclin binding / cyclin-dependent protein kinase inhibitor

Coordinates

chrA03:-:18172966..18173708

Molecular Weight (calculated)

19663.6 Da

IEP (calculated)

4.610

GRAVY (calculated)

-0.873

Length

177 amino acids

Sequence
(BLAST)

001: MSERDPNCKR DARSLEASSQ SHSLLKKKKL DDDFVFLAVP SPSVASSDDS SRGGCSVTSA GEDDDKSSII CFSSESNEIA RKSPTVSVDL ETHQISDDLS
101: VSGRVSHRNE ANLASEEALG ETPEMSKSPT PGEIEEFLSE LESKDQKRFM DKYNFDIVND KPLQGRYKWD RLKPLKE

Best Arabidopsis Sequence Match ( AT3G19150.1 )
(BLAST)

001: MSERKRELAE EASSTSFSPL KKTKLNDSSD SSPDSHDVIV FAVSSSSVAS SAALASDECS VTIGGEESDQ SSSISSGCFT SESKEIAKNS SSFGVDLEDH
101: QIETETETST FITSNFRKET SPVSEGLGET TTEMESSSAT KRKQPGVRKT PTAAEIEDLF SELESQDDKK KQFIEKYNFD IVNDEPLEGR YKWDRL

Arabidopsis Description

KRP6At3g19150 [Source:UniProtKB/TrEMBL;Acc:A6QRA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.