Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 62.71 | 63.79 |
| TraesCS5A01G240600.1 | Wheat | plastid | 54.24 | 35.96 |
| EER99015 | Sorghum | plastid | 47.46 | 32.94 |
| TraesCS5D01G247100.1 | Wheat | plastid | 54.24 | 24.43 |
| TraesCS5B01G238600.1 | Wheat | plastid | 47.46 | 22.05 |
| Bra018812.1-P | Field mustard | nucleus | 55.93 | 20.0 |
| CDY50958 | Canola | nucleus | 55.93 | 19.88 |
| HORVU5Hr1G068770.6 | Barley | nucleus | 49.15 | 18.59 |
| KRH04631 | Soybean | plastid | 45.76 | 16.07 |
| CDY28100 | Canola | nucleus | 49.15 | 15.68 |
| KRH76992 | Soybean | nucleus, plastid | 52.54 | 15.66 |
| KRH71159 | Soybean | nucleus, plastid | 45.76 | 15.34 |
| KRH57804 | Soybean | plastid | 45.76 | 14.67 |
| KRH28480 | Soybean | plastid | 50.85 | 14.63 |
| PGSC0003DMT400066394 | Potato | nucleus | 47.46 | 14.58 |
| KRH50258 | Soybean | nucleus, plastid | 44.07 | 13.9 |
| VIT_07s0031g00800.t01 | Wine grape | plastid | 49.15 | 13.68 |
| AT1G49620.3 | Thale cress | nucleus | 45.76 | 13.5 |
| GSMUA_Achr2P22370_001 | Banana | nucleus | 47.46 | 13.46 |
| VIT_03s0063g00670.t01 | Wine grape | nucleus | 49.15 | 13.24 |
| Solyc01g108610.2.1 | Tomato | nucleus | 47.46 | 12.84 |
| Bra001736.1-P | Field mustard | nucleus | 35.59 | 11.86 |
| AT3G19150.1 | Thale cress | nucleus | 38.98 | 11.73 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 44.07 | 11.71 |
| CDY22987 | Canola | nucleus | 37.29 | 11.46 |
| CDX92305 | Canola | nucleus | 33.9 | 11.36 |
| PGSC0003DMT400040785 | Potato | nucleus | 40.68 | 11.06 |
| CDX82309 | Canola | nucleus | 35.59 | 10.99 |
| Solyc02g090680.2.1 | Tomato | nucleus | 38.98 | 10.85 |
| CDX99264 | Canola | nucleus | 32.2 | 10.8 |
| Bra022391.1-P | Field mustard | nucleus | 11.86 | 4.83 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 |
| EnsemblPlantsGene:GSMUA_Achr9G27040_001 | EnsemblPlants:GSMUA_Achr9P27040_001 | EnsemblPlants:GSMUA_Achr9T27040_001 | UniProt:M0U3W1 | PFAM:PF02234 | PANTHER:PTHR10265 |
| PANTHER:PTHR10265:SF39 | UniParc:UPI000294AD56 | SEG:seg | : | : | : |
Description
Cyclin-dependent kinase inhibitor 1;1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27040_001]
Coordinates
chr9:+:31338412..31338758
Molecular Weight (calculated)
6914.8 Da
IEP (calculated)
4.210
GRAVY (calculated)
-0.790
Length
59 amino acids
Sequence
(BLAST)
(BLAST)
1: MTEASSSWRK AEATPTQAEI EEFFAAAERE QAQQFADKYN YDVVHDVPFD GRFEWVRIN
001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
Arabidopsis Description
KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.