Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 13.94 | 50.0 |
| GSMUA_Achr9P27040_001 | Banana | cytosol, mitochondrion, nucleus | 13.46 | 47.46 |
| TraesCS5A01G240600.1 | Wheat | plastid | 13.94 | 32.58 |
| EER99015 | Sorghum | plastid | 12.02 | 29.41 |
| TraesCS5B01G238600.1 | Wheat | plastid | 17.31 | 28.35 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 28.85 | 27.03 |
| CDY28100 | Canola | nucleus | 23.08 | 25.95 |
| VIT_07s0031g00800.t01 | Wine grape | plastid | 26.44 | 25.94 |
| Bra018812.1-P | Field mustard | nucleus | 20.19 | 25.45 |
| CDY50958 | Canola | nucleus | 20.19 | 25.3 |
| KRH76992 | Soybean | nucleus, plastid | 24.04 | 25.25 |
| KRH50258 | Soybean | nucleus, plastid | 21.15 | 23.53 |
| KRH28480 | Soybean | plastid | 23.08 | 23.41 |
| KRH57804 | Soybean | plastid | 20.67 | 23.37 |
| KRH71159 | Soybean | nucleus, plastid | 19.71 | 23.3 |
| VIT_03s0063g00670.t01 | Wine grape | nucleus | 24.52 | 23.29 |
| Bra001736.1-P | Field mustard | nucleus | 19.23 | 22.6 |
| TraesCS5D01G247100.1 | Wheat | plastid | 13.94 | 22.14 |
| KRH04631 | Soybean | plastid | 17.79 | 22.02 |
| AT3G19150.1 | Thale cress | nucleus | 20.67 | 21.94 |
| CDX82309 | Canola | nucleus | 19.71 | 21.47 |
| CDX92305 | Canola | nucleus | 17.79 | 21.02 |
| AT1G49620.3 | Thale cress | nucleus | 20.19 | 21.0 |
| PGSC0003DMT400040785 | Potato | nucleus | 21.63 | 20.74 |
| CDX99264 | Canola | nucleus | 17.31 | 20.45 |
| CDY22987 | Canola | nucleus | 18.75 | 20.31 |
| PGSC0003DMT400066394 | Potato | nucleus | 18.75 | 20.31 |
| Solyc02g090680.2.1 | Tomato | nucleus | 19.71 | 19.34 |
| HORVU5Hr1G068770.6 | Barley | nucleus | 13.94 | 18.59 |
| Solyc01g108610.2.1 | Tomato | nucleus | 18.27 | 17.43 |
| Bra022391.1-P | Field mustard | nucleus | 10.58 | 15.17 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0004861 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006469 |
| GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0071901 | EnsemblPlantsGene:GSMUA_Achr2G22370_001 | EnsemblPlants:GSMUA_Achr2P22370_001 | EnsemblPlants:GSMUA_Achr2T22370_001 | UniProt:M0SA78 |
| PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF39 | UniParc:UPI000295EFAE | SEG:seg |
Description
Putative Cyclin-dependent kinase inhibitor 3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G22370_001]
Coordinates
chr2:+:21472322..21473796
Molecular Weight (calculated)
22974.9 Da
IEP (calculated)
9.910
GRAVY (calculated)
-0.693
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHSSKRRQ IGELAVMEAT KPMGARTRTA RRLALAALDG RRSSKKRKAT GEYHQISNLE LRSCSVVLKP RIARSAANSG GRRNSSPELS LISRSSSDAS
101: CEAAETPFRS SELGQELDDA TFFRCNGERE ETAASSNDGQ ATSDLESTVE MGSRRRSTAI ATPSVAELEE FFAGAERDLR RRFVERYNFD VVKDVPLAGR
201: YEWIPLTP
101: CEAAETPFRS SELGQELDDA TFFRCNGERE ETAASSNDGQ ATSDLESTVE MGSRRRSTAI ATPSVAELEE FFAGAERDLR RRFVERYNFD VVKDVPLAGR
201: YEWIPLTP
001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
Arabidopsis Description
KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.