Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P09780_001 | Banana | cytosol | 66.67 | 59.28 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 52.17 | 49.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.93 | 48.9 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 56.52 | 47.91 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 50.43 | 42.75 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 38.84 | 37.85 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 38.26 | 37.29 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 38.26 | 37.29 |
| Os09t0111100-01 | Rice | cytosol | 38.84 | 36.81 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 37.39 | 36.75 |
| KRH05626 | Soybean | cytosol | 22.9 | 36.74 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 32.46 | 36.25 |
| PGSC0003DMT400039904 | Potato | nucleus | 33.04 | 35.4 |
| Zm00001d019696_P001 | Maize | cytosol | 39.42 | 35.14 |
| Zm00001d005293_P001 | Maize | cytosol | 39.13 | 34.53 |
| Solyc12g088650.1.1 | Tomato | nucleus | 32.46 | 34.46 |
| PGSC0003DMT400020648 | Potato | nucleus | 33.04 | 34.34 |
| EER96424 | Sorghum | cytosol | 37.97 | 34.29 |
| Solyc04g078470.2.1 | Tomato | nucleus | 33.04 | 33.93 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 37.68 | 33.68 |
| PGSC0003DMT400066557 | Potato | nucleus | 33.91 | 32.68 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 35.07 | 32.53 |
| CDY49278 | Canola | nucleus | 34.2 | 31.98 |
| Solyc01g107730.2.1 | Tomato | nucleus | 33.62 | 31.87 |
| KRH57973 | Soybean | nucleus | 35.36 | 31.85 |
| KRH61348 | Soybean | nucleus | 32.17 | 31.81 |
| Bra017629.1-P | Field mustard | nucleus | 33.91 | 31.79 |
| KRH77050 | Soybean | nucleus, plastid | 30.72 | 31.74 |
| CDX72453 | Canola | nucleus | 33.04 | 31.67 |
| PGSC0003DMT400068629 | Potato | cytosol | 22.03 | 31.67 |
| KRH28424 | Soybean | nucleus | 30.72 | 31.64 |
| KRH15412 | Soybean | cytosol | 24.64 | 31.48 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 15.65 | 31.4 |
| CDY57741 | Canola | nucleus | 32.75 | 30.96 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 22.32 | 30.92 |
| KRH04529 | Soybean | nucleus | 33.04 | 30.73 |
| CDX76265 | Canola | nucleus | 32.46 | 30.68 |
| KRH52038 | Soybean | nucleus | 32.17 | 30.66 |
| CDY30607 | Canola | nucleus | 31.3 | 30.59 |
| Solyc02g092980.2.1 | Tomato | nucleus | 31.59 | 30.36 |
| Bra036051.1-P | Field mustard | nucleus | 31.01 | 30.31 |
| CDY17742 | Canola | nucleus | 31.01 | 30.14 |
| Bra012146.1-P | Field mustard | nucleus | 30.72 | 29.94 |
| Solyc02g064900.1.1 | Tomato | nucleus | 29.86 | 29.77 |
| CDX75405 | Canola | nucleus | 32.17 | 29.76 |
| PGSC0003DMT400064307 | Potato | nucleus | 31.3 | 29.75 |
| CDY01425 | Canola | nucleus | 30.43 | 29.66 |
| Bra034612.1-P | Field mustard | nucleus | 31.59 | 29.62 |
| Bra012909.1-P | Field mustard | nucleus | 28.12 | 29.57 |
| CDY02095 | Canola | nucleus | 28.12 | 29.57 |
| PGSC0003DMT400031329 | Potato | nucleus | 27.54 | 29.5 |
| Bra011501.1-P | Field mustard | nucleus | 31.88 | 29.49 |
| CDY69708 | Canola | nucleus | 31.88 | 29.41 |
| AT4G34160.1 | Thale cress | nucleus | 31.88 | 29.26 |
| CDY12825 | Canola | nucleus | 30.14 | 29.05 |
| CDY23022 | Canola | nucleus | 27.54 | 28.88 |
| CDX83112 | Canola | nucleus | 28.99 | 28.41 |
| Bra029992.1-P | Field mustard | nucleus | 28.99 | 28.41 |
| GSMUA_Achr10P... | Banana | nucleus | 26.38 | 28.35 |
| KRG90996 | Soybean | nucleus | 32.17 | 28.24 |
| CDX68573 | Canola | nucleus | 28.7 | 28.12 |
| Solyc02g064860.1.1 | Tomato | nucleus | 19.13 | 28.09 |
| AT3G50070.1 | Thale cress | nucleus | 29.28 | 27.98 |
| Solyc02g064910.1.1 | Tomato | nucleus | 18.84 | 27.66 |
| KRH35760 | Soybean | nucleus | 32.17 | 27.61 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 23.48 | 27.36 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 27.25 | 27.09 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 27.25 | 26.86 |
| VIT_00s0194g00280.t01 | Wine grape | mitochondrion | 22.03 | 26.67 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 22.9 | 26.07 |
| AT5G67260.2 | Thale cress | nucleus | 30.43 | 25.99 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 18.84 | 25.9 |
| GSMUA_Achr10P... | Banana | nucleus | 25.8 | 25.87 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 25.51 | 25.36 |
| GSMUA_Achr10P... | Banana | nucleus | 26.09 | 25.35 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 22.03 | 25.33 |
| PGSC0003DMT400068627 | Potato | nucleus | 22.61 | 25.32 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 26.09 | 25.14 |
| PGSC0003DMT400011487 | Potato | nucleus | 13.33 | 25.0 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 24.93 | 24.86 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 22.9 | 24.84 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 25.8 | 24.65 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 26.09 | 24.52 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 25.8 | 24.52 |
| GSMUA_Achr2P22330_001 | Banana | nucleus | 25.22 | 24.44 |
| GSMUA_Achr3P21210_001 | Banana | nucleus | 24.93 | 24.36 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 21.16 | 24.01 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 24.06 | 23.78 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 18.84 | 23.38 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 25.8 | 23.36 |
| GSMUA_Achr10P... | Banana | nucleus | 18.55 | 22.38 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 15.36 | 21.9 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 20.0 | 21.56 |
| GSMUA_Achr10P... | Banana | cytosol | 15.07 | 20.55 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 16.23 | 20.36 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 22.03 | 19.54 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 21.45 | 17.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P05260_001 | EnsemblPlants:GSMUA_Achr2T05260_001 | EnsemblPlantsGene:GSMUA_Achr2G05260_001 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF342 | PFAM:PF00134 | SEG:seg | SMART:SM00385 |
| SUPFAM:SSF47954 | UniParc:UPI000295A504 | UniProt:M0S5B7 | MapMan:13.1.1.1.4 | : | : |
Description
Putative Cyclin D3-2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G05260_001]
Coordinates
chr2:+:10448179..10449454
Molecular Weight (calculated)
38442.7 Da
IEP (calculated)
5.027
GRAVY (calculated)
-0.156
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLDPLCCQ EDSLEQEEER KRPMLALLEE PDAVVEEEWA EVLCSLAAKD EETRPELLPG DGGDDAYLLS LRREVVEWVV HAAASHDFSV VTTFLAVNYL
101: DRCFLPHAAA GGLRLQRDKV WMGRLAAVAA LSLAAKVEET RVPLLLDLQV ATPPGTEENR YVFEAKTIRR MELLLLSALS WKMNSVTPLA FIHHLLPRLC
201: LIFLIYTTSS LDWLIEDWRW ARYPASLWAA AALLHAAEGG AGTIAATASV SQLQEKVEEC YQLIMESMVY GGGLFGPKRK HSTSSSYYNV NYSSPHSPNW
301: VIGSCFSCKS SSSGDDSWAT HQPSASPSPE NRPSKKLHRQ ESHWE
101: DRCFLPHAAA GGLRLQRDKV WMGRLAAVAA LSLAAKVEET RVPLLLDLQV ATPPGTEENR YVFEAKTIRR MELLLLSALS WKMNSVTPLA FIHHLLPRLC
201: LIFLIYTTSS LDWLIEDWRW ARYPASLWAA AALLHAAEGG AGTIAATASV SQLQEKVEEC YQLIMESMVY GGGLFGPKRK HSTSSSYYNV NYSSPHSPNW
301: VIGSCFSCKS SSSGDDSWAT HQPSASPSPE NRPSKKLHRQ ESHWE
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.