Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P22330_001 | Banana | nucleus | 71.27 | 71.07 |
| GSMUA_Achr3P21210_001 | Banana | nucleus | 69.3 | 69.69 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 70.99 | 69.42 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 44.79 | 63.86 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 60.56 | 61.96 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 60.28 | 61.14 |
| GSMUA_Achr10P... | Banana | nucleus | 55.21 | 61.06 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 59.72 | 59.22 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 58.03 | 59.03 |
| GSMUA_Achr10P... | Banana | nucleus | 57.18 | 59.01 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 57.46 | 58.79 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 56.9 | 58.38 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 58.31 | 57.34 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 52.39 | 52.99 |
| TraesCS6B01G345300.1 | Wheat | plastid | 52.39 | 52.69 |
| Zm00001d052185_P001 | Maize | nucleus | 52.68 | 51.94 |
| Zm00001d018128_P001 | Maize | nucleus | 51.83 | 51.83 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 52.11 | 51.68 |
| EES07560 | Sorghum | nucleus | 50.42 | 50.0 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 33.52 | 47.22 |
| KXG19603 | Sorghum | nucleus | 41.97 | 42.82 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 35.77 | 34.6 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 28.17 | 33.78 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 28.73 | 33.66 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 34.93 | 32.55 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 22.82 | 32.27 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 27.04 | 31.58 |
| GSMUA_Achr10P... | Banana | nucleus | 24.23 | 30.07 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 32.68 | 29.82 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 24.79 | 29.33 |
| GSMUA_Achr10P... | Banana | cytosol | 20.56 | 28.85 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 22.54 | 28.78 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 22.25 | 28.73 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 19.44 | 28.51 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 25.07 | 27.99 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 25.35 | 26.09 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 26.48 | 25.97 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 28.17 | 25.77 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 22.82 | 25.31 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 29.01 | 25.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.25 | 24.92 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 27.89 | 24.32 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 26.48 | 22.27 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P19230_001 | EnsemblPlants:GSMUA_Achr10T19230_001 | EnsemblPlantsGene:GSMUA_Achr10G19230_001 | Gene3D:1.10.472.10 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | PFAM:PF00134 | PFAM:PF02984 | SEG:seg | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0002959C28 | UniProt:M0RJJ8 | MapMan:13.1.1.1.4 | : |
Description
Cyclin-D3-1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G19230_001]
Coordinates
chr10:-:25685465..25687241
Molecular Weight (calculated)
39431.1 Da
IEP (calculated)
5.636
GRAVY (calculated)
-0.075
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MGISYECGSS ILLCPEDSNS VLGFDEREEQ EQDPEGEVEK RVLGHFPGKR SNFYGGFLMD SALLSEDCIA SLVEKELQHL PQGNYAERLL RGQLDLAVRN
101: DAIDWIQRVH EHYNFGPLTA YLSANYLDRF FSSYELPQGK AWMTQLLSVA CLSLAAKVEE TEAPFSIDLQ VGEAKYVFEA RTIQRMELLV LSTLKWRMQA
201: VTPFSFIVYF LCKFHDANSP DGSLISRSIA LVLATVRGVD FLEFRPSEIA AAVALSALKE IQFLEIDKAL ACCCIHVNKV RRVLRCHEVI QEMALMKNGT
301: YASTSVSAVP KSPIGVLDAA CLSYKSDDTA VGSHANCDHS SPAAKRRKPN RASTS
101: DAIDWIQRVH EHYNFGPLTA YLSANYLDRF FSSYELPQGK AWMTQLLSVA CLSLAAKVEE TEAPFSIDLQ VGEAKYVFEA RTIQRMELLV LSTLKWRMQA
201: VTPFSFIVYF LCKFHDANSP DGSLISRSIA LVLATVRGVD FLEFRPSEIA AAVALSALKE IQFLEIDKAL ACCCIHVNKV RRVLRCHEVI QEMALMKNGT
301: YASTSVSAVP KSPIGVLDAA CLSYKSDDTA VGSHANCDHS SPAAKRRKPN RASTS
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.