Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P21210_001 | Banana | nucleus | 71.07 | 71.67 |
GSMUA_Achr10P... | Banana | nucleus | 71.07 | 71.27 |
GSMUA_Achr6P10260_001 | Banana | cytosol | 68.54 | 67.22 |
GSMUA_Achr6P02210_001 | Banana | plastid | 42.13 | 60.24 |
GSMUA_Achr5P17920_001 | Banana | nucleus | 57.58 | 59.25 |
GSMUA_Achr5P22980_001 | Banana | nucleus | 57.87 | 59.03 |
GSMUA_Achr8P23430_001 | Banana | nucleus | 57.02 | 58.5 |
GSMUA_Achr10P... | Banana | nucleus | 52.25 | 57.94 |
GSMUA_Achr3P06730_001 | Banana | nucleus | 56.46 | 57.93 |
GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 58.15 | 57.82 |
GSMUA_Achr9P15070_001 | Banana | nucleus | 56.74 | 57.71 |
GSMUA_Achr7P12850_001 | Banana | nucleus | 57.3 | 56.51 |
GSMUA_Achr10P... | Banana | nucleus | 53.37 | 55.23 |
HORVU6Hr1G077500.1 | Barley | nucleus | 49.44 | 50.14 |
TraesCS6B01G345300.1 | Wheat | plastid | 49.72 | 50.14 |
Zm00001d052185_P001 | Maize | nucleus | 49.16 | 48.61 |
TraesCS6A01G314900.1 | Wheat | nucleus | 48.6 | 48.32 |
Zm00001d018128_P001 | Maize | nucleus | 47.75 | 47.89 |
EES07560 | Sorghum | nucleus | 46.91 | 46.65 |
TraesCS6D01G294200.1 | Wheat | nucleus | 31.18 | 44.05 |
KXG19603 | Sorghum | nucleus | 41.29 | 42.24 |
GSMUA_Achr3P06030_001 | Banana | cytosol | 29.21 | 35.14 |
GSMUA_Achr9P28180_001 | Banana | nucleus | 29.49 | 34.65 |
GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 24.16 | 34.26 |
GSMUA_Achr7P26100_001 | Banana | nucleus | 33.99 | 32.97 |
GSMUA_Achr1P22570_001 | Banana | nucleus | 34.55 | 32.28 |
GSMUA_Achr6P24270_001 | Banana | nucleus | 26.97 | 31.58 |
GSMUA_Achr7P19980_001 | Banana | nucleus | 32.58 | 29.82 |
GSMUA_Achr10P... | Banana | nucleus | 23.88 | 29.72 |
GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 19.94 | 29.34 |
GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 24.72 | 29.33 |
GSMUA_Achr6P16910_001 | Banana | cytosol | 22.47 | 28.78 |
GSMUA_Achr6P07740_001 | Banana | nucleus | 25.28 | 28.3 |
GSMUA_Achr10P... | Banana | cytosol | 19.38 | 27.27 |
GSMUA_Achr6P34040_001 | Banana | nucleus | 20.79 | 26.91 |
GSMUA_Achr4P07110_001 | Banana | nucleus | 23.03 | 25.62 |
GSMUA_Achr1P09780_001 | Banana | cytosol | 27.81 | 25.52 |
GSMUA_Achr2P05260_001 | Banana | nucleus | 24.44 | 25.22 |
GSMUA_Achr4P20220_001 | Banana | nucleus | 25.28 | 24.86 |
GSMUA_AchrUn_... | Banana | cytosol | 21.35 | 23.97 |
GSMUA_Achr3P13140_001 | Banana | nucleus | 26.97 | 23.59 |
GSMUA_Achr9P12120_001 | Banana | nucleus | 27.81 | 23.46 |
GSMUA_Achr3P01010_001 | Banana | nucleus | 26.69 | 23.34 |
Protein Annotations
Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr2G22330_001 | EnsemblPlants:GSMUA_Achr2P22330_001 |
EnsemblPlants:GSMUA_Achr2T22330_001 | UniProt:M0SA74 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00029653B4 |
Description
Putative Cyclin-D3-1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G22330_001]
Coordinates
chr2:-:21441871..21443665
Molecular Weight (calculated)
39645.3 Da
IEP (calculated)
5.262
GRAVY (calculated)
-0.196
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSYKYASS ILLCPEDSSS ILGFDDGEGE EQDLHGEAQR RDLCQSPDKK SGFCGAILMD FTLQSEDCVV ELVERESQHR PQGDYAERLL RGQLDMVARS
101: DAIDWIQKVH AHHNFGPLTA YLSINYLDRF LSSYELPQGK AWIPQLLSVA CLSLAAKVEE TEVPLSLELQ VGDANHVFEA RTIHRMELLV LGTLKWRMQA
201: LTPFSFIGYF LYKFSDGNLP DSLLTSSSVD LILGTVREID FLEYRPSEIA AAVALSVLKD TQILDLDQAL ARCIHVNKER VFKCHRVIQE MTSMKNRTNR
301: NTSPSISAVP KSPIGVLDAA CLSDESDDLA VESHGNCLLH SSPAAKKRKL NRPSTS
101: DAIDWIQKVH AHHNFGPLTA YLSINYLDRF LSSYELPQGK AWIPQLLSVA CLSLAAKVEE TEVPLSLELQ VGDANHVFEA RTIHRMELLV LGTLKWRMQA
201: LTPFSFIGYF LYKFSDGNLP DSLLTSSSVD LILGTVREID FLEYRPSEIA AAVALSVLKD TQILDLDQAL ARCIHVNKER VFKCHRVIQE MTSMKNRTNR
301: NTSPSISAVP KSPIGVLDAA CLSDESDDLA VESHGNCLLH SSPAAKKRKL NRPSTS
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.