Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01425 | Canola | nucleus | 93.3 | 94.35 |
| AT5G67260.2 | Thale cress | nucleus | 77.93 | 69.06 |
| CDY23022 | Canola | nucleus | 63.41 | 69.0 |
| CDY02095 | Canola | nucleus | 62.85 | 68.6 |
| CDX83112 | Canola | nucleus | 66.2 | 67.33 |
| CDX68573 | Canola | nucleus | 65.36 | 66.48 |
| CDY30607 | Canola | nucleus | 64.53 | 65.44 |
| CDY17742 | Canola | nucleus | 63.13 | 63.66 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 27.37 | 56.98 |
| KRH04529 | Soybean | nucleus | 54.19 | 52.29 |
| KRH57973 | Soybean | nucleus | 54.19 | 50.65 |
| Solyc02g092980.2.1 | Tomato | nucleus | 48.32 | 48.19 |
| PGSC0003DMT400064307 | Potato | nucleus | 48.04 | 47.38 |
| PGSC0003DMT400031329 | Potato | nucleus | 42.46 | 47.2 |
| KRH77050 | Soybean | nucleus, plastid | 43.85 | 47.01 |
| KRH28424 | Soybean | nucleus | 43.02 | 45.97 |
| CDX75405 | Canola | nucleus | 46.65 | 44.77 |
| CDY69708 | Canola | nucleus | 46.09 | 44.12 |
| CDX76265 | Canola | nucleus | 44.69 | 43.84 |
| PGSC0003DMT400068629 | Potato | cytosol | 29.33 | 43.75 |
| CDX72453 | Canola | nucleus | 43.58 | 43.33 |
| CDY57741 | Canola | nucleus | 44.13 | 43.29 |
| CDY49278 | Canola | nucleus | 44.41 | 43.09 |
| Solyc02g064900.1.1 | Tomato | nucleus | 41.06 | 42.49 |
| Solyc02g064860.1.1 | Tomato | nucleus | 27.37 | 41.7 |
| Solyc02g064910.1.1 | Tomato | nucleus | 27.09 | 41.28 |
| PGSC0003DMT400068627 | Potato | nucleus | 34.64 | 40.26 |
| PGSC0003DMT400011487 | Potato | nucleus | 20.39 | 39.67 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 31.84 | 31.49 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 34.08 | 31.44 |
| CDX81286 | Canola | nucleus | 22.91 | 30.83 |
| CDY38800 | Canola | nucleus | 27.37 | 30.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.09 | 30.6 |
| CDY11608 | Canola | nucleus | 27.09 | 30.6 |
| CDY54717 | Canola | nucleus | 22.63 | 30.45 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 29.05 | 30.14 |
| CDY13755 | Canola | nucleus | 24.58 | 30.14 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.61 | 29.94 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.33 | 29.66 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.33 | 29.66 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 33.52 | 29.48 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 28.77 | 29.34 |
| CDY67142 | Canola | nucleus | 27.37 | 28.91 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 32.68 | 28.75 |
| Os09t0111100-01 | Rice | cytosol | 28.21 | 27.75 |
| CDY08795 | Canola | nucleus | 23.46 | 27.27 |
| CDY59943 | Canola | nucleus | 27.37 | 27.15 |
| CDY14561 | Canola | cytosol | 24.58 | 27.08 |
| CDX97009 | Canola | nucleus | 21.79 | 26.62 |
| CDX76917 | Canola | nucleus | 26.26 | 26.55 |
| CDY37828 | Canola | nucleus | 22.91 | 26.54 |
| CDX69832 | Canola | nucleus | 21.79 | 26.26 |
| CDY33959 | Canola | nucleus | 22.35 | 26.23 |
| Zm00001d019696_P001 | Maize | cytosol | 28.21 | 26.1 |
| EER96424 | Sorghum | cytosol | 27.37 | 25.65 |
| CDX89480 | Canola | nucleus | 25.42 | 25.63 |
| CDY25602 | Canola | nucleus | 25.42 | 25.56 |
| Zm00001d005293_P001 | Maize | cytosol | 27.65 | 25.32 |
| CDY22116 | Canola | nucleus | 19.27 | 23.15 |
| CDY21951 | Canola | nucleus | 19.27 | 22.85 |
| CDY55121 | Canola | cytosol | 20.95 | 21.87 |
| CDY29570 | Canola | nucleus | 19.83 | 21.26 |
| CDY40332 | Canola | cytosol | 19.83 | 20.88 |
| CDY10467 | Canola | cytosol | 19.55 | 20.65 |
| CDX72643 | Canola | nucleus | 19.55 | 20.59 |
| CDX90892 | Canola | nucleus | 8.66 | 20.39 |
| CDX80803 | Canola | cytosol | 20.95 | 16.63 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078FEL8 | UniProt:A0A078FEL8 | EnsemblPlants:CDY12825 | ProteinID:CDY12825 |
| ProteinID:CDY12825.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00070457001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0004EBBF0B | SEG:seg | : | : | : |
Description
BnaC07g16080DBnaC07g16080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEL8]
Coordinates
chrLK032027:+:407699..408940
Molecular Weight (calculated)
41378.7 Da
IEP (calculated)
4.971
GRAVY (calculated)
-0.195
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEKEQEES QIGQNAPFCA LDELYCEEEC AFVEEDLVGI DDNVVKFQFL PLKDMFSWDD DELQSLISKE NETNHHPYQT LDECLVSRRK EALNWVFRVK
101: SHYGFASSTA LLAVNYFDRF ITSVKFQTDK PWMSQLVAVA CLSLAAKVEE IHVPLLIHLQ VEEARYVFEA KTIQRMELLV LSTLQWRMHP VTPISFFDHI
201: IRRLGSECHQ QLELFSNCER LLISVVTDTR FMSYVPSVLA TAIMIHVIKG LKPCEQVEYQ SQLMTLLKVN QEKVNECYEL LLEHNPSKKR MMNWLDQDRP
301: SGVFDIDDSS NGSWNVSAAS VASSLSPEPL LKRRRVHEQQ MRLPSINPMF LDVLSSPR
101: SHYGFASSTA LLAVNYFDRF ITSVKFQTDK PWMSQLVAVA CLSLAAKVEE IHVPLLIHLQ VEEARYVFEA KTIQRMELLV LSTLQWRMHP VTPISFFDHI
201: IRRLGSECHQ QLELFSNCER LLISVVTDTR FMSYVPSVLA TAIMIHVIKG LKPCEQVEYQ SQLMTLLKVN QEKVNECYEL LLEHNPSKKR MMNWLDQDRP
301: SGVFDIDDSS NGSWNVSAAS VASSLSPEPL LKRRRVHEQQ MRLPSINPMF LDVLSSPR
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.