Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13755 | Canola | nucleus | 79.94 | 96.92 |
| CDY25602 | Canola | nucleus | 84.46 | 83.99 |
| CDX89480 | Canola | nucleus | 83.33 | 83.1 |
| AT2G22490.2 | Thale cress | nucleus | 77.4 | 75.69 |
| CDX81286 | Canola | nucleus | 36.16 | 48.12 |
| Solyc11g010460.1.1 | Tomato | cytosol | 42.37 | 48.08 |
| Solyc05g051410.2.1 | Tomato | nucleus | 46.05 | 47.38 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 33.05 | 46.99 |
| PGSC0003DMT400037827 | Potato | nucleus | 45.48 | 46.8 |
| CDY54717 | Canola | nucleus | 35.03 | 46.62 |
| CDX69832 | Canola | nucleus | 38.42 | 45.79 |
| KRH45568 | Soybean | nucleus | 44.63 | 45.66 |
| CDY08795 | Canola | nucleus | 39.55 | 45.45 |
| CDX97009 | Canola | nucleus | 37.29 | 45.05 |
| KRG99448 | Soybean | nucleus | 45.48 | 44.97 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 43.79 | 43.91 |
| GSMUA_Achr10P... | Banana | nucleus | 42.66 | 43.9 |
| KRH69654 | Soybean | cytosol | 29.94 | 43.62 |
| KRH74510 | Soybean | nucleus | 44.07 | 43.21 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 42.66 | 43.14 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 42.09 | 43.06 |
| GSMUA_Achr10P... | Banana | nucleus | 38.98 | 42.99 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 42.09 | 42.94 |
| CDY33959 | Canola | nucleus | 36.72 | 42.62 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 41.53 | 42.36 |
| CDY14561 | Canola | cytosol | 38.7 | 42.15 |
| CDY37828 | Canola | nucleus | 36.72 | 42.07 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 41.24 | 41.83 |
| PGSC0003DMT400041637 | Potato | nucleus | 45.76 | 41.12 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 41.24 | 40.78 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 40.96 | 40.17 |
| TraesCS6B01G345300.1 | Wheat | plastid | 38.7 | 38.81 |
| EES07560 | Sorghum | nucleus | 38.42 | 37.99 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 37.57 | 37.89 |
| Zm00001d052185_P001 | Maize | nucleus | 38.42 | 37.78 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 37.85 | 37.43 |
| Zm00001d018128_P001 | Maize | nucleus | 37.01 | 36.9 |
| KXG19603 | Sorghum | nucleus | 34.75 | 35.34 |
| CDY11608 | Canola | nucleus | 30.51 | 34.07 |
| CDY38800 | Canola | nucleus | 30.23 | 33.54 |
| CDY67142 | Canola | nucleus | 31.92 | 33.33 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 22.88 | 32.14 |
| CDY59943 | Canola | nucleus | 31.92 | 31.3 |
| CDY17742 | Canola | nucleus | 29.94 | 29.86 |
| CDX68573 | Canola | nucleus | 29.66 | 29.83 |
| CDX83112 | Canola | nucleus | 29.66 | 29.83 |
| CDY30607 | Canola | nucleus | 29.66 | 29.75 |
| CDY02095 | Canola | nucleus | 27.4 | 29.57 |
| CDY23022 | Canola | nucleus | 27.12 | 29.18 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 13.56 | 27.91 |
| CDY57741 | Canola | nucleus | 27.97 | 27.12 |
| CDX72453 | Canola | nucleus | 27.4 | 26.94 |
| CDX76265 | Canola | nucleus | 27.68 | 26.85 |
| CDY49278 | Canola | nucleus | 27.97 | 26.83 |
| CDX75405 | Canola | nucleus | 27.68 | 26.27 |
| CDY12825 | Canola | nucleus | 26.55 | 26.26 |
| CDY69708 | Canola | nucleus | 27.68 | 26.2 |
| CDY22116 | Canola | nucleus | 21.75 | 25.84 |
| CDY01425 | Canola | nucleus | 25.71 | 25.71 |
| CDY21951 | Canola | nucleus | 21.47 | 25.17 |
| CDY29570 | Canola | nucleus | 21.75 | 23.05 |
| CDX72643 | Canola | nucleus | 22.03 | 22.94 |
| CDY10467 | Canola | cytosol | 20.34 | 21.24 |
| CDY55121 | Canola | cytosol | 20.34 | 20.99 |
| CDY40332 | Canola | cytosol | 20.06 | 20.88 |
| CDX90892 | Canola | nucleus | 8.47 | 19.74 |
| CDX80803 | Canola | cytosol | 20.06 | 15.74 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078CJK4 | EnsemblPlants:CDX76917 | ProteinID:CDX76917 | ProteinID:CDX76917.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00127442001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EF266F | SEG:seg | : | : | : | : |
Description
BnaC08g35030D
Coordinates
chrLK031808:+:2042335..2044153
Molecular Weight (calculated)
39897.4 Da
IEP (calculated)
5.167
GRAVY (calculated)
-0.372
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESLSCGET TDSWITDETN CDGGFMNDEL FSKDDNFNGN GSNPMMGSLP SPSLREERIR EMMEREVEFL PGADYLKRLR SGDWELRVRN QALDWILKVC
101: AHYNFGTLCI CLSMNYLDRF LTSYELPRDK SWAVQLLAVS CLSLAAKMEE SDVPQTVELQ QVGDPKFVFE AKTVKRMELL VLNTLNWRLQ ALTPFSFIDH
201: FIHKTKGHVS ENSIYRSSQF ILNTTKAIEF LDFRPSEIAA AAAVSVTISG EVNCIDDEKT MSNLTCVKQQ ERVKVCLNLM RNLTGEDVTG ATLSSRQPRL
301: AARVVPVIPI GVLEATCLSC RSDERTVESC TNSSQSSPDT NNNNNNSNKR RRKQ
101: AHYNFGTLCI CLSMNYLDRF LTSYELPRDK SWAVQLLAVS CLSLAAKMEE SDVPQTVELQ QVGDPKFVFE AKTVKRMELL VLNTLNWRLQ ALTPFSFIDH
201: FIHKTKGHVS ENSIYRSSQF ILNTTKAIEF LDFRPSEIAA AAAVSVTISG EVNCIDDEKT MSNLTCVKQQ ERVKVCLNLM RNLTGEDVTG ATLSSRQPRL
301: AARVVPVIPI GVLEATCLSC RSDERTVESC TNSSQSSPDT NNNNNNSNKR RRKQ
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.