Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011501.1-P | Field mustard | nucleus | 98.39 | 98.39 |
| CDY69708 | Canola | nucleus | 95.98 | 95.72 |
| CDY57741 | Canola | nucleus | 83.91 | 85.75 |
| CDX76265 | Canola | nucleus | 83.91 | 85.75 |
| AT4G34160.1 | Thale cress | nucleus | 85.79 | 85.11 |
| CDX72453 | Canola | nucleus | 81.5 | 84.44 |
| CDY49278 | Canola | nucleus | 82.84 | 83.74 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 47.19 | 56.96 |
| PGSC0003DMT400066557 | Potato | nucleus | 51.47 | 53.63 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 54.42 | 52.59 |
| Solyc01g107730.2.1 | Tomato | nucleus | 50.94 | 52.2 |
| KRG90996 | Soybean | nucleus | 53.89 | 51.15 |
| KRH35760 | Soybean | nucleus | 53.08 | 49.25 |
| CDY01425 | Canola | nucleus | 45.04 | 47.46 |
| CDY12825 | Canola | nucleus | 44.77 | 46.65 |
| CDY02095 | Canola | nucleus | 41.02 | 46.65 |
| CDY23022 | Canola | nucleus | 40.21 | 45.59 |
| CDX68573 | Canola | nucleus | 42.9 | 45.45 |
| CDY30607 | Canola | nucleus | 42.9 | 45.33 |
| CDX83112 | Canola | nucleus | 42.36 | 44.89 |
| CDY17742 | Canola | nucleus | 42.36 | 44.51 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 19.84 | 43.02 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 34.58 | 33.25 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 29.76 | 32.17 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 30.83 | 31.77 |
| CDY11608 | Canola | nucleus | 26.81 | 31.55 |
| CDY13755 | Canola | nucleus | 24.66 | 31.51 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 34.32 | 31.45 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 29.22 | 31.05 |
| CDY38800 | Canola | nucleus | 26.54 | 31.03 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.22 | 30.79 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.22 | 30.79 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.22 | 30.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.01 | 30.6 |
| CDY67142 | Canola | nucleus | 27.35 | 30.09 |
| CDX81286 | Canola | nucleus | 21.45 | 30.08 |
| CDY54717 | Canola | nucleus | 21.18 | 29.7 |
| Os09t0111100-01 | Rice | cytosol | 28.69 | 29.4 |
| CDY59943 | Canola | nucleus | 27.88 | 28.81 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 31.37 | 28.75 |
| CDY08795 | Canola | nucleus | 23.32 | 28.25 |
| CDY14561 | Canola | cytosol | 24.13 | 27.69 |
| CDX76917 | Canola | nucleus | 26.27 | 27.68 |
| CDX89480 | Canola | nucleus | 26.27 | 27.61 |
| CDY37828 | Canola | nucleus | 22.79 | 27.51 |
| CDY25602 | Canola | nucleus | 26.01 | 27.25 |
| CDY33959 | Canola | nucleus | 22.25 | 27.21 |
| Zm00001d019696_P001 | Maize | cytosol | 28.15 | 27.13 |
| EER96424 | Sorghum | cytosol | 27.61 | 26.96 |
| Zm00001d005293_P001 | Maize | cytosol | 27.88 | 26.6 |
| CDY29570 | Canola | nucleus | 23.59 | 26.35 |
| CDX72643 | Canola | nucleus | 23.06 | 25.29 |
| CDX69832 | Canola | nucleus | 19.84 | 24.92 |
| CDX97009 | Canola | nucleus | 19.57 | 24.91 |
| CDY22116 | Canola | nucleus | 18.5 | 23.15 |
| CDY21951 | Canola | nucleus | 18.23 | 22.52 |
| CDX90892 | Canola | nucleus | 8.85 | 21.71 |
| CDY55121 | Canola | cytosol | 18.77 | 20.41 |
| CDY40332 | Canola | cytosol | 18.5 | 20.29 |
| CDY10467 | Canola | cytosol | 18.23 | 20.06 |
| CDX80803 | Canola | cytosol | 18.23 | 15.08 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A068F489 | UniProt:A0A068F489 | ProteinID:AID60128.1 | EnsemblPlants:CDX75405 |
| ProteinID:CDX75405 | ProteinID:CDX75405.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00121292001 | PFAM:PF00134 |
| PFAM:PF02984 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF351 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0004A888B5 | SEG:seg | : | : | : |
Description
BnaA01g02970DBnaA01g02970D protein [Source:UniProtKB/TrEMBL;Acc:A0A068F489]
Coordinates
chrLK031804:+:963835..965203
Molecular Weight (calculated)
42443.4 Da
IEP (calculated)
4.450
GRAVY (calculated)
-0.264
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIPKEEESR EEHNTSFLLD ALYCEEEKWE DDEEEEVEAV EENSSFSSAS TSSPLAILQQ DLFWEDEDLV TLFSKEEEQG LGCVDDVYLA TDRKEAVGWI
101: LRVNSHYGFS TLAAVLAITY LDKFICSYSL QRDKPWMLQL VSVACLSLAA KVEETHVPLL LDFQVEETKY VFEAKTIQRM ELLILSTLQW KMHLVTPLSF
201: LDHIIRRLGL KNNAHWDFLN SCHRLILSVI SDSRFVGYLP SVVAAATMMR IIEQVEPFDP LSYQTKLLGV LNMTKEKVKS CYDLILELPM GLQIETQSRR
301: KRKSSDSPSC VIDSNPFNSD ESSNDSWSAS SNNPPSSSPQ QQQPPLKKMR GDQETQKEIP VLHLPWAIVV ASP
101: LRVNSHYGFS TLAAVLAITY LDKFICSYSL QRDKPWMLQL VSVACLSLAA KVEETHVPLL LDFQVEETKY VFEAKTIQRM ELLILSTLQW KMHLVTPLSF
201: LDHIIRRLGL KNNAHWDFLN SCHRLILSVI SDSRFVGYLP SVVAAATMMR IIEQVEPFDP LSYQTKLLGV LNMTKEKVKS CYDLILELPM GLQIETQSRR
301: KRKSSDSPSC VIDSNPFNSD ESSNDSWSAS SNNPPSSSPQ QQQPPLKKMR GDQETQKEIP VLHLPWAIVV ASP
001: MAIRKEEESR EEQSNSFLLD ALYCEEEKWD DEGEEVEENS SLSSSSSPFV VLQQDLFWED EDLVTLFSKE EEQGLSCLDD VYLSTDRKEA VGWILRVNAH
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
Arabidopsis Description
CYCD3-1Cyclin-D3-1 [Source:UniProtKB/Swiss-Prot;Acc:P42753]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.