Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX67944 | nucleus |
| CDX68497 | |
| CDX68573 | nucleus |
| CDX69407 | |
| CDX69832 | nucleus |
| CDX70730 | |
| CDX70734 | |
| CDX72453 | nucleus |
| CDX72643 | nucleus |
| CDX75405 | nucleus |
| CDX76265 | nucleus |
| CDX78722 | |
| CDX79389 | nucleus |
| CDX81722 | nucleus |
| CDX83047 | |
| CDX83112 | nucleus |
| CDX85477 | |
| CDX87018 | |
| CDX87305 | nucleus |
| CDX90892 | nucleus |
| CDX96836 | nucleus |
| CDX97009 | nucleus |
| CDY02095 | nucleus |
| CDY02737 | |
| CDY05870 | |
| CDY11608 | |
| CDY16965 | |
| CDY21951 | nucleus |
| CDY22116 | nucleus |
| CDY22369 | nucleus |
| CDY23022 | nucleus |
| CDY29570 | nucleus |
| CDY36574 | nucleus |
| CDY37592 | nucleus |
| CDY38664 | nucleus |
| CDY38800 | |
| CDY39984 | nucleus |
| CDY48212 | nucleus |
| CDY49278 | nucleus |
| CDY53304 | nucleus |
| CDY57741 | nucleus |
| CDY59943 | |
| CDY61993 | nucleus |
| CDY66197 | |
| CDY66415 | nucleus |
| CDY67142 | |
| CDY67496 | |
| CDY69253 | |
| CDY69708 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039199.1-P | Field mustard | mitochondrion, nucleus, plastid | 91.18 | 91.18 |
| CDY46075 | Canola | nucleus | 81.18 | 90.79 |
| AT2G23430.1 | Thale cress | mitochondrion, nucleus | 67.65 | 60.21 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | GO:A0A078J9P4 | UniProt:A0A078J9P4 | InterPro:CDI | EnsemblPlants:CDY63966 |
| ProteinID:CDY63966 | ProteinID:CDY63966.1 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 | EnsemblPlantsGene:GSBRNA2T00040753001 |
| PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF30 | UniParc:UPI0004EDE6DB | SEG:seg |
Description
BnaCnng42870DBnaCnng42870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9P4]
Coordinates
chrLK034378:-:8547..10062
Molecular Weight (calculated)
19311.5 Da
IEP (calculated)
8.474
GRAVY (calculated)
-1.044
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKCRKAKG TVGASSTYMQ LRSRRIVYRS EKASSSSSCC ASNNNGVIDL EEERDGETET SSCRRKGKLF ENLREKKSSK SMENSQQIVA SFDSAGKESS
101: DCCCSRRASL STTEDKGKPT AEQPPTAVEI EEFFVEAEKQ LHDKFKKKYN FDFEKEKPLE GRYEWVKLSE
101: DCCCSRRASL STTEDKGKPT AEQPPTAVEI EEFFVEAEKQ LHDKFKKKYN FDFEKEKPLE GRYEWVKLSE
001: MVRKYRKAKG IVEAGVSSTY MQLRSRRIVY VRSEKSSSVS VVGDNGVSSS CSGSNEYKKK ELIHLEEEDK DGDTETSTYR RGTKRKLFEN LREEEKEELS
101: KSMENYSSEF ESAVKESLDC CCSGRKTMEE TVTAEEEEKA KLMTEMPTES EIEDFFVEAE KQLKEKFKKK YNFDFEKEKP LEGRYEWVKL E
101: KSMENYSSEF ESAVKESLDC CCSGRKTMEE TVTAEEEEKA KLMTEMPTES EIEDFFVEAE KQLKEKFKKK YNFDFEKEKP LEGRYEWVKL E
Arabidopsis Description
KRP1Cyclin-dependent kinase inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y93]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.