Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018036.1-P | Field mustard | cytosol | 94.09 | 75.85 |
| CDX68497 | Canola | cytosol | 93.67 | 75.51 |
| AT3G48750.1 | Thale cress | cytosol | 92.41 | 74.49 |
| CDX83047 | Canola | cytosol | 93.67 | 71.15 |
| CDY66197 | Canola | cytosol | 94.09 | 65.98 |
| VIT_15s0045g00310.t01 | Wine grape | cytosol | 80.59 | 64.97 |
| TraesCS6B01G105100.1 | Wheat | cytosol | 79.75 | 64.51 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 79.32 | 64.16 |
| KRH42252 | Soybean | cytosol | 78.48 | 63.27 |
| KRH36887 | Soybean | cytosol, nucleus | 78.06 | 62.93 |
| KRH11866 | Soybean | cytosol, nucleus | 78.06 | 62.93 |
| Zm00001d053930_P001 | Maize | cytosol | 76.79 | 62.33 |
| KRH58370 | Soybean | cytosol | 78.48 | 62.0 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 75.95 | 61.22 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 75.95 | 61.22 |
| EES04403 | Sorghum | cytosol | 75.53 | 61.09 |
| GSMUA_Achr11P... | Banana | cytosol | 71.73 | 60.5 |
| CDY05870 | Canola | cytosol, plastid | 93.67 | 58.58 |
| KXG40336 | Sorghum | cytosol | 72.15 | 58.16 |
| Solyc08g066330.1.1 | Tomato | cytosol | 75.11 | 57.98 |
| Zm00001d048497_P002 | Maize | cytosol | 73.84 | 57.76 |
| TraesCS4D01G347600.1 | Wheat | cytosol | 75.95 | 55.05 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 75.95 | 52.79 |
| PGSC0003DMT400077428 | Potato | cytosol | 64.14 | 51.01 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 79.32 | 50.81 |
| Os02t0123100-01 | Rice | mitochondrion | 78.9 | 49.73 |
| Zm00001d027373_P003 | Maize | cytosol | 75.11 | 48.5 |
| CDY69065 | Canola | cytosol | 26.58 | 41.45 |
| CDY45733 | Canola | cytosol, plastid, vacuole | 26.58 | 41.45 |
| CDY13189 | Canola | cytosol | 53.16 | 41.45 |
| CDX76164 | Canola | cytosol | 52.74 | 41.12 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 53.59 | 40.97 |
| CDY07716 | Canola | cytosol | 53.16 | 40.78 |
| CDX88294 | Canola | cytosol | 51.48 | 38.98 |
| CDY31856 | Canola | cytosol | 51.9 | 38.92 |
| CDY01345 | Canola | cytosol | 51.9 | 38.92 |
| CDX87588 | Canola | cytosol | 50.21 | 38.02 |
| CDY67496 | Canola | cytosol | 44.73 | 33.54 |
| CDX87784 | Canola | cytosol | 35.02 | 31.2 |
| CDY36228 | Canola | cytosol | 42.62 | 29.11 |
| CDX96131 | Canola | cytosol | 42.62 | 29.11 |
| CDY60132 | Canola | cytosol | 45.99 | 27.46 |
| CDX73001 | Canola | cytosol | 45.57 | 27.2 |
| CDX81858 | Canola | cytosol | 43.04 | 26.22 |
| CDX96739 | Canola | cytosol | 43.46 | 26.21 |
| CDY21722 | Canola | cytosol | 42.62 | 25.96 |
| CDX83876 | Canola | cytosol | 43.04 | 25.82 |
| CDY60036 | Canola | cytosol | 46.41 | 23.5 |
| CDX81189 | Canola | cytosol, nucleus, plastid | 40.08 | 21.84 |
| CDY09272 | Canola | cytosol | 38.82 | 19.96 |
| CDX76497 | Canola | cytosol | 38.82 | 19.96 |
| CDY38979 | Canola | cytosol | 35.87 | 19.41 |
| CDY01580 | Canola | cytosol | 37.13 | 19.09 |
| CDY56886 | Canola | nucleus | 40.93 | 18.95 |
| CDY37922 | Canola | nucleus | 41.35 | 18.49 |
| CDY49306 | Canola | cytosol | 37.13 | 18.41 |
| CDY13047 | Canola | cytosol | 35.87 | 18.28 |
| CDY39427 | Canola | cytosol | 36.29 | 17.92 |
| CDY23116 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 35.87 | 15.1 |
| CDY01821 | Canola | nucleus | 43.88 | 14.92 |
| CDX96081 | Canola | nucleus | 44.3 | 14.81 |
| CDY26373 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX87783 | Canola | extracellular, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.1.1 | Gene3D:3.30.200.20 | GO:A0A078DIC5 | EnsemblPlants:CDX87018 | ProteinID:CDX87018 |
| ProteinID:CDX87018.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00145886001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF323 | InterPro:Prot_kinase_dom |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE5FB4 | : | : |
Description
BnaC03g52880D
Coordinates
chrLK031848:-:1667319..1670229
Molecular Weight (calculated)
27510.5 Da
IEP (calculated)
8.236
GRAVY (calculated)
-0.200
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHSNIVKLQ DVVHSERRLY LVFEYLDLDL KKHMDSSLDF SKDLHMIKAY LYQILRGIAY CHSHRVLHRD LKPQNLLIDR RTNSLKLADF GLARAFGIPV
101: RTFTHEVVTL WYRTPEILLG SHHYSTPVDI WSVGCIFAEM ITQKPLFPGD SKIDQLFKIF RIMGNPYEDT WPGVTSLPDY KSAFPKWKQT GLESFVPNLD
201: PNGIDLLYKM LLMDPTKRIN AGAALEHDYF KDLGVMP
101: RTFTHEVVTL WYRTPEILLG SHHYSTPVDI WSVGCIFAEM ITQKPLFPGD SKIDQLFKIF RIMGNPYEDT WPGVTSLPDY KSAFPKWKQT GLESFVPNLD
201: PNGIDLLYKM LLMDPTKRIN AGAALEHDYF KDLGVMP
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.