Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX67944 | nucleus |
| CDX69768 | nucleus |
| CDX72643 | nucleus |
| CDX77145 | nucleus |
| CDX77932 | nucleus |
| CDX79389 | nucleus |
| CDX79470 | nucleus |
| CDX81722 | nucleus |
| CDX82309 | nucleus |
| CDX84726 | nucleus |
| CDX85466 | nucleus |
| CDX87305 | nucleus |
| CDX90892 | nucleus |
| CDX92305 | nucleus |
| CDX93038 | nucleus |
| CDX93296 | nucleus |
| CDX96631 | nucleus |
| CDX96836 | nucleus |
| CDX97090 | nucleus |
| CDX99264 | nucleus |
| CDY02078 | nucleus |
| CDY02719 | nucleus |
| CDY12181 | nucleus |
| CDY17793 | nucleus |
| CDY19160 | nucleus |
| CDY21951 | nucleus |
| CDY22116 | nucleus |
| CDY22369 | nucleus |
| CDY22987 | nucleus |
| CDY23003 | nucleus |
| CDY23793 | nucleus |
| CDY25649 | nucleus |
| CDY29520 | nucleus |
| CDY29570 | nucleus |
| CDY30517 | nucleus |
| CDY31481 | nucleus |
| CDY33634 | nucleus |
| CDY36574 | nucleus |
| CDY37592 | nucleus |
| CDY38664 | nucleus |
| CDY39984 | nucleus |
| CDY46075 | nucleus |
| CDY48212 | nucleus |
| CDY53304 | nucleus |
| CDY59640 | nucleus |
| CDY61993 | nucleus |
| CDY62475 | nucleus |
| CDY63966 | nucleus |
| CDY65994 | nucleus |
| CDY66415 | nucleus |
| CDY69551 | nucleus |
| CDY71628 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21722 | Canola | cytosol | 98.71 | 98.71 |
| Bra031013.1-P | Field mustard | cytosol | 94.09 | 97.08 |
| CDX96739 | Canola | cytosol | 95.37 | 94.4 |
| CDX83876 | Canola | cytosol | 94.09 | 92.66 |
| AT1G18040.1 | Thale cress | cytosol | 91.0 | 90.54 |
| CDX73001 | Canola | cytosol | 81.49 | 79.85 |
| CDY60132 | Canola | cytosol | 80.72 | 79.09 |
| KRH41782 | Soybean | cytosol, nucleus | 69.92 | 74.93 |
| KRH39114 | Soybean | nucleus | 76.61 | 72.51 |
| KRH48600 | Soybean | cytosol | 74.29 | 72.07 |
| KRH60482 | Soybean | cytosol | 75.58 | 71.88 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 63.24 | 70.89 |
| PGSC0003DMT400032131 | Potato | cytosol | 74.04 | 68.74 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 73.78 | 68.5 |
| CDY36228 | Canola | cytosol | 60.15 | 67.44 |
| CDX96131 | Canola | cytosol | 60.15 | 67.44 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 72.24 | 66.12 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 71.72 | 65.8 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 71.72 | 65.8 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 71.72 | 65.8 |
| EES18176 | Sorghum | cytosol | 68.89 | 62.62 |
| Zm00001d010476_P001 | Maize | cytosol | 68.89 | 62.62 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 73.78 | 60.81 |
| Zm00001d038109_P002 | Maize | cytosol | 66.58 | 60.23 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 73.01 | 56.69 |
| CDX68497 | Canola | cytosol | 35.22 | 46.6 |
| CDX83047 | Canola | cytosol | 35.48 | 44.23 |
| CDX87018 | Canola | cytosol | 26.22 | 43.04 |
| CDX88294 | Canola | cytosol | 32.9 | 40.89 |
| CDX87588 | Canola | cytosol | 32.65 | 40.58 |
| CDY66197 | Canola | cytosol | 35.22 | 40.53 |
| CDY31856 | Canola | cytosol | 32.65 | 40.19 |
| CDY01345 | Canola | cytosol | 32.65 | 40.19 |
| CDY45733 | Canola | cytosol, plastid, vacuole | 15.68 | 40.13 |
| CDX76164 | Canola | cytosol | 31.36 | 40.13 |
| CDY13189 | Canola | cytosol | 31.36 | 40.13 |
| CDY69065 | Canola | cytosol | 15.68 | 40.13 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 31.36 | 39.35 |
| CDY07716 | Canola | cytosol | 31.11 | 39.16 |
| CDY05870 | Canola | cytosol, plastid | 35.22 | 36.15 |
| CDX87784 | Canola | cytosol | 21.34 | 31.2 |
| CDY60036 | Canola | cytosol | 35.48 | 29.49 |
| CDX81189 | Canola | cytosol, nucleus, plastid | 31.88 | 28.51 |
| CDY67496 | Canola | cytosol | 21.59 | 26.58 |
| CDY38979 | Canola | cytosol | 29.82 | 26.48 |
| CDX76497 | Canola | cytosol | 30.85 | 26.03 |
| CDY09272 | Canola | cytosol | 30.85 | 26.03 |
| CDY01580 | Canola | cytosol | 30.59 | 25.81 |
| CDY13047 | Canola | cytosol | 29.82 | 24.95 |
| CDY39427 | Canola | cytosol | 30.59 | 24.79 |
| CDY49306 | Canola | cytosol | 28.53 | 23.22 |
| CDY37922 | Canola | nucleus | 29.56 | 21.7 |
| CDY56886 | Canola | nucleus | 27.51 | 20.9 |
| CDY23116 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 29.31 | 20.25 |
| CDY01821 | Canola | nucleus | 34.96 | 19.51 |
| CDX96081 | Canola | nucleus | 34.96 | 19.18 |
| CDY26373 | Canola | mitochondrion | 1.29 | 5.62 |
| CDX87783 | Canola | extracellular, mitochondrion | 1.54 | 5.08 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| GO:A0A078D3H8 | EnsemblPlants:CDX81858 | ProteinID:CDX81858 | ProteinID:CDX81858.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00136804001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE5350 | : |
Description
BnaC08g37430D
Coordinates
chrLK031826:-:1132440..1135038
Molecular Weight (calculated)
44289.9 Da
IEP (calculated)
10.063
GRAVY (calculated)
-0.385
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQPKKVADR YLKQEVLGQG TYGVVFKATD TKTGETVAIK KIRLGKHKEV VNITALREIK MLNELKHPHI ILLIDAFPHK ENLHLVFEFM ETDLEGVIRD
101: SNVFLSPADI KSYLLMTLKG LAYCHEKWVL HRDMKPNNLL IGPDGQLKLA DFGLARIFGT PDRKFTHQVF ARWYRAPELL FGAKQYGAAV DVWAAGCVFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMKKLP DYVEYQFVPA PSLRSLFPSV SEDALDLLSK MFTYDPKARI SVKQALEHRY FTSAPSPTDP
301: AKLPKPLRKQ ESKASYGKHE AIKVVSPPRK IRRVMPERGR VDGMKSHVDK DQQAPMSLDF TVLAERPPNR PTITSADRSH LKRKLDLDF
101: SNVFLSPADI KSYLLMTLKG LAYCHEKWVL HRDMKPNNLL IGPDGQLKLA DFGLARIFGT PDRKFTHQVF ARWYRAPELL FGAKQYGAAV DVWAAGCVFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMKKLP DYVEYQFVPA PSLRSLFPSV SEDALDLLSK MFTYDPKARI SVKQALEHRY FTSAPSPTDP
301: AKLPKPLRKQ ESKASYGKHE AIKVVSPPRK IRRVMPERGR VDGMKSHVDK DQQAPMSLDF TVLAERPPNR PTITSADRSH LKRKLDLDF
001: MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
Arabidopsis Description
CDKD-3Cyclin-dependent kinase D-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.