Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18176 | Sorghum | cytosol | 98.6 | 98.6 |
| Zm00001d038109_P002 | Maize | cytosol | 94.39 | 93.95 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 83.41 | 84.2 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 83.41 | 84.2 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 82.71 | 83.49 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 82.24 | 82.82 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 62.85 | 77.52 |
| KRH41782 | Soybean | cytosol, nucleus | 64.49 | 76.03 |
| KRH60482 | Soybean | cytosol | 68.93 | 72.13 |
| VIT_17s0000g02960.t01 | Wine grape | cytosol | 71.03 | 72.04 |
| PGSC0003DMT400032131 | Potato | cytosol | 70.33 | 71.84 |
| KRH39114 | Soybean | nucleus | 68.93 | 71.78 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 69.86 | 71.36 |
| KRH48600 | Soybean | cytosol | 66.59 | 71.07 |
| CDX96131 | Canola | cytosol | 57.24 | 70.61 |
| CDY36228 | Canola | cytosol | 57.24 | 70.61 |
| AT1G66750.1 | Thale cress | cytosol | 56.54 | 69.54 |
| CDY21722 | Canola | cytosol | 63.08 | 69.41 |
| AT1G18040.1 | Thale cress | cytosol | 63.08 | 69.05 |
| CDX81858 | Canola | cytosol | 62.62 | 68.89 |
| CDX96739 | Canola | cytosol | 63.08 | 68.7 |
| Bra031013.1-P | Field mustard | cytosol | 60.51 | 68.7 |
| Bra016572.1-P | Field mustard | cytosol | 62.85 | 68.45 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 74.77 | 67.8 |
| CDX83876 | Canola | cytosol | 62.38 | 67.59 |
| AT1G73690.1 | Thale cress | cytosol | 62.62 | 67.34 |
| Bra015974.1-P | Field mustard | cytosol | 61.92 | 66.75 |
| CDX73001 | Canola | cytosol | 61.68 | 66.5 |
| CDY60132 | Canola | cytosol | 60.98 | 65.74 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 73.83 | 63.07 |
| Zm00001d048497_P002 | Maize | cytosol | 32.94 | 46.53 |
| Zm00001d053930_P001 | Maize | cytosol | 31.54 | 46.23 |
| Zm00001d044672_P005 | Maize | cytosol | 30.37 | 39.27 |
| Zm00001d046912_P001 | Maize | cytosol, mitochondrion, peroxisome | 29.67 | 39.08 |
| Zm00001d027373_P003 | Maize | cytosol | 32.94 | 38.42 |
| Zm00001d031485_P001 | Maize | mitochondrion | 29.44 | 38.3 |
| Zm00001d014438_P001 | Maize | cytosol | 32.24 | 29.3 |
| Zm00001d034834_P009 | Maize | cytosol | 26.64 | 26.89 |
| Zm00001d000169_P009 | Maize | cytosol | 27.1 | 25.0 |
| Zm00001d017729_P023 | Maize | cytosol | 28.5 | 24.9 |
| Zm00001d035964_P001 | Maize | cytosol | 25.47 | 23.19 |
| Zm00001d003222_P016 | Maize | nucleus | 30.61 | 18.77 |
| Zm00001d017128_P002 | Maize | nucleus | 28.97 | 18.67 |
| Zm00001d025739_P006 | Maize | nucleus | 30.37 | 18.06 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100272776 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 |
| Gene3D:3.30.200.20 | ProteinID:AQK94128.1 | ProteinID:AQK94129.1 | UniProt:B4FQK6 | EMBL:BT039394 | EMBL:EU967414 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI00017B824B | EnsemblPlantsGene:Zm00001d010476 | EnsemblPlants:Zm00001d010476_P001 | EnsemblPlants:Zm00001d010476_T001 | SEG:seg | : |
Description
CDC2+/CDC28-related protein kinase R2 [Source:UniProtKB/TrEMBL;Acc:B4FQK6]
Coordinates
chr8:+:117146840..117163644
Molecular Weight (calculated)
47761.5 Da
IEP (calculated)
9.409
GRAVY (calculated)
-0.442
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAGNSGSG DDDAGGKLLA DRYQKGEVLG EGTYGVVFKA IDTKTGNTVA VKRIRIGKDK KEGVNFTALR EIKLLKELKD PNIIELIDCF PYKENLHLVF
101: EFMETDLEAL IKDKNIILSP ADTKSYVQMM LKGLAFCHKK WVLHRDMKPN NLLIGADGQL KLADFGLARV FGSPGRNFTH QVFARWYRAP ELLFGSKQYG
201: SGVDIWAAGC IFAELLTRRA FLQGSSDIDQ LGKIFAALGT PKSSQWPDMV YLPDYVEYQY VAAPPLRTLF PMASDDALDL LSKMLTYDPK ARISAQQALE
301: HRYFSSLPAP TRPSQLPRPR RKGDQGNNKI PDLNLQDGPM VLSPPRKLRR VTAHEGMEGM HRTDKVDEHP SGMRHTDDMP SQSSRIPMSV DVGAVFGTRP
401: APRPTLNSAD KSRLKRKLDM DPEFGYAE
101: EFMETDLEAL IKDKNIILSP ADTKSYVQMM LKGLAFCHKK WVLHRDMKPN NLLIGADGQL KLADFGLARV FGSPGRNFTH QVFARWYRAP ELLFGSKQYG
201: SGVDIWAAGC IFAELLTRRA FLQGSSDIDQ LGKIFAALGT PKSSQWPDMV YLPDYVEYQY VAAPPLRTLF PMASDDALDL LSKMLTYDPK ARISAQQALE
301: HRYFSSLPAP TRPSQLPRPR RKGDQGNNKI PDLNLQDGPM VLSPPRKLRR VTAHEGMEGM HRTDKVDEHP SGMRHTDDMP SQSSRIPMSV DVGAVFGTRP
401: APRPTLNSAD KSRLKRKLDM DPEFGYAE
001: MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
Arabidopsis Description
CDKD-3Cyclin-dependent kinase D-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.