Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 98.33 | 98.33 |
| KRH41782 | Soybean | cytosol, nucleus | 69.93 | 80.72 |
| VIT_17s0000g02960.t01 | Wine grape | cytosol | 80.91 | 80.33 |
| KRH39114 | Soybean | nucleus | 78.28 | 79.81 |
| KRH48600 | Soybean | cytosol | 76.13 | 79.55 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 65.63 | 79.25 |
| KRH60482 | Soybean | cytosol | 76.37 | 78.24 |
| AT1G18040.1 | Thale cress | cytosol | 69.93 | 74.94 |
| CDY21722 | Canola | cytosol | 68.97 | 74.29 |
| CDX81858 | Canola | cytosol | 68.74 | 74.04 |
| CDX96739 | Canola | cytosol | 69.21 | 73.79 |
| Bra016572.1-P | Field mustard | cytosol | 68.97 | 73.54 |
| Bra031013.1-P | Field mustard | cytosol | 65.63 | 72.94 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 73.75 | 72.88 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 73.75 | 72.88 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 73.75 | 72.88 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 73.75 | 72.71 |
| AT1G66750.1 | Thale cress | cytosol | 60.14 | 72.41 |
| CDX83876 | Canola | cytosol | 68.26 | 72.41 |
| CDX96131 | Canola | cytosol | 59.9 | 72.33 |
| CDY36228 | Canola | cytosol | 59.9 | 72.33 |
| AT1G73690.1 | Thale cress | cytosol | 68.5 | 72.11 |
| CDX73001 | Canola | cytosol | 67.54 | 71.28 |
| CDY60132 | Canola | cytosol | 67.06 | 70.78 |
| Bra015974.1-P | Field mustard | cytosol | 67.06 | 70.78 |
| EES18176 | Sorghum | cytosol | 71.84 | 70.33 |
| Zm00001d010476_P001 | Maize | cytosol | 71.84 | 70.33 |
| Zm00001d038109_P002 | Maize | cytosol | 68.97 | 67.21 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 75.66 | 67.16 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 74.7 | 62.48 |
| PGSC0003DMT400075349 | Potato | cytosol | 31.5 | 44.9 |
| PGSC0003DMT400071215 | Potato | cytosol | 30.31 | 41.91 |
| PGSC0003DMT400047738 | Potato | cytosol | 28.64 | 39.6 |
| PGSC0003DMT400077428 | Potato | cytosol | 27.45 | 38.59 |
| PGSC0003DMT400025910 | Potato | cytosol | 28.88 | 38.41 |
| PGSC0003DMT400092022 | Potato | cytosol | 19.57 | 37.79 |
| PGSC0003DMT400086876 | Potato | cytosol | 27.21 | 36.19 |
| PGSC0003DMT400065635 | Potato | cytosol | 24.58 | 33.01 |
| PGSC0003DMT400047517 | Potato | cytosol | 29.12 | 27.11 |
| PGSC0003DMT400051979 | Potato | cytosol | 27.21 | 26.09 |
| PGSC0003DMT400044987 | Potato | nucleus | 31.98 | 16.81 |
| PGSC0003DMT400034649 | Potato | nucleus | 32.22 | 16.44 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:102591981 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 |
| Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| UniProt:M1AWX7 | PFAM:PF00069 | EnsemblPlantsGene:PGSC0003DMG400012334 | PGSC:PGSC0003DMG400012334 | EnsemblPlants:PGSC0003DMT400032131 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00029542CA | RefSeq:XP_006343958.1 | SEG:seg |
Description
CDK activating kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400012334]
Coordinates
chr8:+:54975745..54983155
Molecular Weight (calculated)
47786.7 Da
IEP (calculated)
8.777
GRAVY (calculated)
-0.486
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEVEKLLAM NRKAADRYLK REVLGEGTYG VVYKAIDTKS GQVVAIKKIR LGKQKEGVNF TALREIKLLK ELKDPSVIEL IECFPHKGNL HLVFEFMETD
101: LEAVIRDRNI FLSPADIKSY IQMTLKGLAF CHKKWVLHRD MKPNNLLIGP DGQLKLADFG LARIFGSPDR RFTHQVFARW YRAPELLFGA KQYGPGVDVW
201: AAACIFAELL LRRPFLQGNS DIDQLGKIFA AFGTPKPSQW HDMVYLPDYV EYQYVPGQPF KTLFPTATDD CLDLLSKMFT YDPKARISAQ QALEHRYFSS
301: GPPPTEPALL PRPPPKREPG NPKVSDLDPH DGPVVLSPPR KSRRVMPHRE GFEANVHPEK MDDHENEIRH SAGERSEQVP MSLDFSVFGM KPPTRPTINS
401: ADRSHLKRKL DLEFQPEEE
101: LEAVIRDRNI FLSPADIKSY IQMTLKGLAF CHKKWVLHRD MKPNNLLIGP DGQLKLADFG LARIFGSPDR RFTHQVFARW YRAPELLFGA KQYGPGVDVW
201: AAACIFAELL LRRPFLQGNS DIDQLGKIFA AFGTPKPSQW HDMVYLPDYV EYQYVPGQPF KTLFPTATDD CLDLLSKMFT YDPKARISAQ QALEHRYFSS
301: GPPPTEPALL PRPPPKREPG NPKVSDLDPH DGPVVLSPPR KSRRVMPHRE GFEANVHPEK MDDHENEIRH SAGERSEQVP MSLDFSVFGM KPPTRPTINS
401: ADRSHLKRKL DLEFQPEEE
001: MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
Arabidopsis Description
CDKD-3Cyclin-dependent kinase D-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.