Factsheet for VIT_14s0006g02280.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0199g00210.t01	nucleus, nucleus
VIT_01s0011g04490.t01
VIT_01s0026g00710.t01	nucleus
VIT_02s0012g00530.t01
VIT_03s0063g00070.t01
VIT_03s0063g00670.t01	nucleus, nucleus
VIT_04s0008g04260.t01	nucleus, nucleus
VIT_04s0008g05010.t01
VIT_04s0023g02400.t01
VIT_05s0029g00040.t01	nucleus, nucleus
VIT_06s0061g00810.t01	nucleus, nucleus, nucleus, nucleus, nucleus
VIT_07s0005g06340.t01	nucleus, nucleus
VIT_07s0031g00800.t01	nucleus, nucleus
VIT_07s0031g02680.t01
VIT_07s0129g00200.t01	nucleus, nucleus, nucleus
VIT_08s0040g00930.t01	nucleus
VIT_09s0002g05240.t01	nucleus, nucleus, nucleus
VIT_09s0018g01930.t01
VIT_09s0054g00600.t01
VIT_10s0092g00280.t01
VIT_12s0134g00500.t01	nucleus, nucleus, nucleus
VIT_13s0067g01420.t01	nucleus
VIT_15s0021g00460.t01
VIT_15s0048g01980.t01
VIT_16s0013g02120.t01
VIT_17s0000g02900.t01
VIT_18s0001g02060.t01	nucleus
VIT_18s0001g09580.t01	nucleus
VIT_18s0001g13740.t01
VIT_18s0001g14170.t01	nucleus, nucleus
VIT_18s0089g00420.t01
VIT_19s0014g04520.t01
VIT_19s0015g01390.t01
VIT_19s0085g00690.t01
VIT_19s0093g00580.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18040.1	VIT_09s0002g05240.t01	AT1G15570.1	20407024
AT1G18040.1	VIT_18s0001g14170.t01	AT1G20610.1	20407024
AT1G18040.1	VIT_18s0001g02060.t01	AT1G44110.1	20407024
AT1G18040.1	VIT_09s0002g05240.t01	AT1G80370.1	20407024
AT1G18040.1	VIT_06s0061g00810.t01	AT2G27960.1	20407024
AT1G18040.1	VIT_06s0061g00810.t01	AT2G27970.1	20407024
AT1G18040.1	VIT_05s0029g00040.t01	AT2G32710.1	20407024
AT1G18040.1	VIT_08s0040g00930.t01	AT3G11520.1	20407024
AT1G18040.1	VIT_13s0067g01420.t01	AT3G11520.1	20407024
AT1G18040.1	VIT_03s0063g00670.t01	AT3G19150.1	20407024
AT1G18040.1	VIT_07s0031g00800.t01	AT3G19150.1	20407024
AT1G18040.1	VIT_07s0005g06340.t01	AT3G24810.1	20407024
AT1G18040.1	VIT_12s0134g00500.t01	AT4G03270.1	20407024
AT1G18040.1	VIT_07s0129g00200.t01	AT4G37630.1	20407024
AT1G18040.1	VIT_04s0008g04260.t01	AT5G11300.1	20407024
AT1G18040.1	VIT_18s0001g09580.t01	AT5G43080.1	20407024
AT1G66750.1	VIT_09s0002g05240.t01	AT1G15570.1	20407024
AT1G66750.1	VIT_19s0085g00690.t01	AT1G16330.1	20407024
AT1G66750.1	VIT_02s0012g00530.t01	AT1G32380.1	20706207
AT1G66750.1	VIT_03s0063g00070.t01	AT1G49760.1	20706207
AT1G66750.1	VIT_09s0018g01930.t01	AT1G51650.1	20706207
AT1G66750.1	VIT_10s0092g00280.t01	AT1G51650.1	20706207
AT1G66750.1	VIT_18s0089g00420.t01	AT1G51650.1	20706207
AT1G66750.1	VIT_19s0014g04520.t01	AT1G51650.1	20706207
AT1G66750.1	VIT_19s0015g01390.t01	AT1G55750.1	20706207
AT1G66750.1	VIT_19s0093g00580.t01	AT1G66340.1	20706207
AT1G66750.1	VIT_06s0061g00810.t01	AT2G27960.1	20407024
AT1G66750.1	VIT_06s0061g00810.t01	AT2G27970.1	20407024
AT1G66750.1	VIT_05s0029g00040.t01	AT2G32710.1	20407024
AT1G66750.1	VIT_15s0021g00460.t01	AT2G44530.1	20706207
AT1G66750.1	VIT_08s0040g00930.t01	AT3G11520.1	20407024
AT1G66750.1	VIT_13s0067g01420.t01	AT3G11520.1	20407024
AT1G66750.1	VIT_03s0063g00670.t01	AT3G19150.1	20407024
AT1G66750.1	VIT_07s0031g00800.t01	AT3G19150.1	20407024
AT1G66750.1	VIT_09s0054g00600.t01	AT3G21140.1	20706207
AT1G66750.1	VIT_07s0005g06340.t01	AT3G24810.1	20407024
AT1G66750.1	VIT_12s0134g00500.t01	AT4G03270.1	20407024
AT1G66750.1	VIT_16s0013g02120.t01	AT4G30825.1	20706207
AT1G66750.1	VIT_04s0023g02400.t01	AT4G36490.1	20706207
AT1G66750.1	VIT_07s0129g00200.t01	AT4G37630.1	20407024
AT1G66750.1	VIT_18s0001g13740.t01	AT4G38900.1	20706207
AT1G66750.1	VIT_01s0011g04490.t01	AT5G08670.1	17426018
AT1G66750.1	VIT_17s0000g02900.t01	AT5G08670.1	17426018
AT1G66750.1	VIT_01s0011g04490.t01	AT5G08690.1	17426018
AT1G66750.1	VIT_17s0000g02900.t01	AT5G08690.1	17426018
AT1G66750.1	VIT_00s0199g00210.t01	AT5G10440.1	20407024
AT1G66750.1	VIT_04s0008g04260.t01	AT5G11300.1	20407024
AT1G66750.1	VIT_04s0008g05010.t01	AT5G25460.1	20706207
AT1G66750.1	VIT_07s0031g02680.t01	AT5G63610.1	20407024
AT1G73690.1	VIT_09s0002g05240.t01	AT1G15570.1	20407024
AT1G73690.1	VIT_19s0085g00690.t01	AT1G16330.1	20407024
AT1G73690.1	VIT_18s0001g14170.t01	AT1G20610.1	20407024
AT1G73690.1	VIT_01s0026g00710.t01	AT1G70210.1	20407024
AT1G73690.1	VIT_06s0061g00810.t01	AT2G27970.1	20407024
AT1G73690.1	VIT_05s0029g00040.t01	AT2G32710.1	20407024
AT1G73690.1	VIT_15s0048g01980.t01	AT3G61140.1	20706207
AT1G73690.1	VIT_12s0134g00500.t01	AT4G03270.1	20407024
AT1G73690.1	VIT_07s0129g00200.t01	AT4G37630.1	20407024
AT1G73690.1	VIT_00s0199g00210.t01	AT5G10440.1	20407024
AT1G73690.1	VIT_04s0008g04260.t01	AT5G11300.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G66750.1	Thale cress	cytosol	73.78	73.56
CDX96131	Canola	cytosol	73.49	73.49
CDY36228	Canola	cytosol	73.49	73.49
VIT_17s0000g02960.t01	Wine grape	cytosol	80.4	66.11
Solyc08g081280.2.1	Tomato	cytosol, nucleus	79.54	65.87
PGSC0003DMT400032131	Potato	cytosol	79.25	65.63
Bra031013.1-P	Field mustard	cytosol	71.18	65.52
AT1G18040.1	Thale cress	cytosol	73.78	65.47
TraesCS1D01G245300.1	Wheat	cytosol	78.96	64.62
TraesCS1B01G256600.1	Wheat	cytosol	78.96	64.62
TraesCS1A01G245600.1	Wheat	cytosol	78.96	64.62
HORVU1Hr1G062980.2	Barley	cytosol	78.67	64.24
CDY21722	Canola	cytosol	70.89	63.24
CDX81858	Canola	cytosol	70.89	63.24
Zm00001d010476_P001	Maize	cytosol	77.52	62.85
CDX96739	Canola	cytosol	70.89	62.6
EES18176	Sorghum	cytosol	76.95	62.38
Bra016572.1-P	Field mustard	cytosol	70.61	62.34
AT1G73690.1	Thale cress	cytosol	71.18	62.06
CDX83876	Canola	cytosol	69.74	61.27
CDX73001	Canola	cytosol	70.03	61.21
Bra015974.1-P	Field mustard	cytosol	70.03	61.21
GSMUA_Achr3P09020_001	Banana	cytosol	82.71	60.81
CDY60132	Canola	cytosol	69.45	60.71
Zm00001d038109_P002	Maize	cytosol	75.22	60.7
GSMUA_Achr9P17590_001	Banana	cytosol	83.86	58.08
VIT_15s0045g00310.t01	Wine grape	cytosol	40.06	47.28
VIT_08s0056g00210.t01	Wine grape	cytosol	37.46	42.9
VIT_18s0122g00550.t01	Wine grape	cytosol	36.02	38.7
VIT_07s0031g02680.t01	Wine grape	cytosol	38.62	27.86
VIT_09s0070g00320.t01	Wine grape	cytosol	20.46	27.1
VIT_02s0033g01110.t01	Wine grape	cytosol	33.43	25.66
VIT_07s0151g00350.t01	Wine grape	mitochondrion	32.85	24.31
VIT_17s0000g01810.t01	Wine grape	nucleus	35.73	23.26
VIT_01s0010g02550.t01	Wine grape	nucleus	36.6	16.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100244503	wikigene:100244503	MapMan:13.1.1.2.4	MapMan:14.6.3.1.3	MapMan:15.3.5.6.2.2
MapMan:18.4.3.1.4	Gene3D:3.30.200.20	ProteinID:CBI33605	ProteinID:CBI33605.3	UniProt:D7TSY3	EMBL:FN596245
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0045944	GO:GO:0051726	GO:GO:0070985	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100244503	wikigene:LOC100244503	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF242	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CD41A	ArrayExpress:VIT_14s0006g02280	EnsemblPlantsGene:VIT_14s0006g02280	EnsemblPlants:VIT_14s0006g02280.t01
unigene:Vvi.2177	RefSeq:XP_002266432	RefSeq:XP_002266432.1	:	:	:

Description

No Description!

Coordinates

chr14:+:19628877..19652796

Molecular Weight (calculated)

39552.1 Da

IEP (calculated)

9.428

GRAVY (calculated)

-0.299

Length

347 amino acids

Sequence
(BLAST)

001: MLDEKKKAAD RYLKRQVLGE GTYGVVYKAF DTMTGQTVAI KRIRLGNYKE GVNFTALREI KLLKELKDPN IIELIDAFPH DGNLHLVFEF MQTDLEAVIR
101: DRNIVLSLAD IKSYMQMTLK GLAYCHKKWV VHRDMKPNNL LIGEDGQLKL ADFGLARIFG SPNRKFTYQV FARWYRAPEL LFGAKQYGSG VDIWAVACIF
201: AELLLRRPFL QGSSDIDQLG KIFAAFGTPK PSQWPDMVCL PNYMEYQYVP APPLRTLFPT ATDDALDLLA KMFTYDPRAR ISAEQALEHR YFSSLPLPTK
301: PAELRIPPPK GDSSNPEPLD LNQQQSGPTV LSPSRKLRRV TLDHERI

Best Arabidopsis Sequence Match ( AT1G66750.1 )
(BLAST)

001: MSKSGDNQPV DRYLRRQILG EGTYGVVYKA TDTKTGKTVA VKKIRLGNQK EGVNFTALRE IKLLKELNHP HIVELIDAFP HDGSLHLVFE YMQTDLEAVI
101: RDRNIFLSPG DIKSYMLMTL KGLAYCHKKW VLHRDMKPNN LLIGENGLLK LADFGLARLF GSPNRRFTHQ VFATWYRAPE LLFGSRQYGA GVDVWAAGCI
201: FAELLLRRPF LPGSTEIDQL GKIFQAFGTP VPSQWSDMIY LPDYMEFSYT PAPPLRTIFP MASDDALDLL AKMFIYDPRQ RITIQQALDH RYFSSSPSPT
301: EPGKLQIPAS KGDALEPKAS EQNQHGNSPA VLSPPGKMRR VMGPEGFT

Arabidopsis Description

CDKD-2CDKD [Source:UniProtKB/TrEMBL;Acc:A0A178WBE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.