Factsheet for VIT_07s0031g02680.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0199g00210.t01	nucleus
VIT_01s0026g00710.t01	endoplasmic reticulum
VIT_03s0063g00670.t01	nucleus
VIT_03s0180g00040.t01	nucleus
VIT_04s0008g04260.t01	nucleus
VIT_07s0031g00800.t01	nucleus
VIT_07s0129g00200.t01	nucleus
VIT_07s0129g01100.t01	nucleus
VIT_09s0002g05240.t01	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	VIT_09s0002g05240.t01	AT1G15570.1	20407024
AT5G63610.1	VIT_01s0026g00710.t01	AT1G70210.1	20407024
AT5G63610.1	VIT_03s0063g00670.t01	AT3G19150.1	20407024
AT5G63610.1	VIT_07s0031g00800.t01	AT3G19150.1	20407024
AT5G63610.1	VIT_03s0180g00040.t01	AT4G34160.1	20407024
AT5G63610.1	VIT_07s0129g01100.t01	AT4G34160.1	20407024
AT5G63610.1	VIT_07s0129g00200.t01	AT4G37630.1	20407024
AT5G63610.1	VIT_00s0199g00210.t01	AT5G10440.1	20407024
AT5G63610.1	VIT_04s0008g04260.t01	AT5G11300.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g027870.1.1	Tomato	cytosol	62.37	89.29
KRH59626	Soybean	cytosol	56.13	87.1
KRH63972	Soybean	cytosol	81.7	85.06
KRH40974	Soybean	cytosol, nucleus	79.21	82.65
GSMUA_Achr11P...	Banana	cytosol	77.96	80.47
GSMUA_Achr5P18030_001	Banana	cytosol	76.92	79.23
OQU92050	Sorghum	cytosol	77.13	78.77
Zm00001d014438_P001	Maize	cytosol	76.51	78.13
Os10t0580300-01	Rice	cytosol, plasma membrane	77.13	78.11
TraesCS1A01G198100.2	Wheat	cytosol	76.09	77.87
TraesCS1D01G201600.1	Wheat	cytosol	76.09	77.87
HORVU1Hr1G051380.3	Barley	cytosol	75.88	77.66
TraesCS1B01G212800.1	Wheat	cytosol	75.88	77.66
AT5G63610.1	Thale cress	cytosol	74.84	76.6
Bra037748.1-P	Field mustard	cytosol	74.01	76.07
CDY60036	Canola	cytosol	73.8	75.85
CDX81189	Canola	cytosol, nucleus, plastid	68.4	75.63
KRH57887	Soybean	cytosol	35.34	72.03
VIT_15s0045g00310.t01	Wine grape	cytosol	28.27	46.26
VIT_08s0056g00210.t01	Wine grape	cytosol	28.07	44.55
VIT_18s0122g00550.t01	Wine grape	cytosol	27.03	40.25
VIT_14s0006g02280.t01	Wine grape	cytosol	27.86	38.62
VIT_17s0000g02960.t01	Wine grape	cytosol	29.73	33.89
VIT_09s0070g00320.t01	Wine grape	cytosol	16.22	29.77
VIT_02s0033g01110.t01	Wine grape	cytosol	26.2	27.88
VIT_17s0000g01810.t01	Wine grape	nucleus	29.73	26.83
VIT_07s0151g00350.t01	Wine grape	mitochondrion	24.12	24.73
VIT_01s0010g02550.t01	Wine grape	nucleus	31.39	20.03

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100249168	wikigene:100249168	MapMan:13.1.1.2.5	MapMan:15.3.3.4.3	MapMan:18.4.3.1.5
Gene3D:3.30.200.20	ProteinID:CBI21620	ProteinID:CBI21620.3	UniProt:D7SWH1	EMBL:FN595233	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016592	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100249168	wikigene:LOC100249168	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CA183	ArrayExpress:VIT_07s0031g02680	EnsemblPlantsGene:VIT_07s0031g02680	EnsemblPlants:VIT_07s0031g02680.t01
unigene:Vvi.24733	RefSeq:XP_002273171	RefSeq:XP_002273171.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:19079469..19094407

Molecular Weight (calculated)

53066.8 Da

IEP (calculated)

9.779

GRAVY (calculated)

-0.392

Length

481 amino acids

Sequence
(BLAST)

001: MGDGTTATSN RGGGGNGGSG SNKPAWLQQY DLIGKIGEGT YGLVFLARTK SPSNRGKSIA IKKFKQSKDG DGVSPTAIRE IMLLREISHE NVVKLVNVHI
101: NHADMSLYLA FDYAEHDLYE IIRHHRDKVT NPIHPYTVKS LLWQLLNGLN YLHSNWIIHR DLKPSNILVM GEGDEQGVVK IADFGLARIY QAPLKPLSDN
201: GVVVTIWYRA PELLLGAKHY TSAVDMWAVG CIFAELLTLK PLFQGAEVKA TPNPFQLDQL DKIFRVLGHP TQEKWPTLVN LPHWQSDVQH IQGHKYENPG
301: LYSVVHLPLK SAAYDLLSKM LEYDPRKRIT AAQALDHEYF RSEPLPGRNA LVPSQAGAEK VMNYPTRPVD TTTDFEGTNS LQTSQPVSSG NAVSGSMAAG
401: HVVPNRSVPR PMPVVGMQRI QAQGMSAYNL TSQAAMGGGM NPGSIPMQRG VAAQAHQQQM RRKDPGMGMP GYPPQQKSRR F

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.