Factsheet for HORVU1Hr1G051380.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G114440.21	nucleus
HORVU4Hr1G013700.2	nucleus
HORVU5Hr1G018180.1	nucleus
HORVU5Hr1G050270.8	nucleus, nucleus
HORVU5Hr1G059770.2	endoplasmic reticulum
HORVU5Hr1G068770.6	nucleus
HORVU5Hr1G080210.1
HORVU5Hr1G117990.1
HORVU6Hr1G077500.1	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	HORVU3Hr1G114440.21	AT1G15570.1	20407024
AT5G63610.1	HORVU5Hr1G059770.2	AT1G70210.1	20407024
AT5G63610.1	HORVU5Hr1G068770.6	AT3G19150.1	20407024
AT5G63610.1	HORVU5Hr1G050270.8	AT3G50070.1	20407024
AT5G63610.1	HORVU5Hr1G050270.8	AT4G34160.1	20407024
AT5G63610.1	HORVU4Hr1G013700.2	AT4G37630.1	20407024
AT5G63610.1	HORVU5Hr1G018180.1	AT4G37630.1	20407024
AT5G63610.1	HORVU6Hr1G077500.1	AT5G10440.1	20407024
AT5G63610.1	HORVU5Hr1G080210.1	AT5G51910.1	21798944
AT5G63610.1	HORVU5Hr1G117990.1	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G201600.1	Wheat	cytosol	99.57	99.57
TraesCS1A01G198100.2	Wheat	cytosol	99.57	99.57
TraesCS1B01G212800.1	Wheat	cytosol	99.36	99.36
Os10t0580300-01	Rice	cytosol, plasma membrane	93.4	92.42
OQU92050	Sorghum	cytosol	90.85	90.66
Zm00001d014438_P001	Maize	cytosol	89.57	89.38
KRH59626	Soybean	cytosol	55.96	84.84
Solyc12g027870.1.1	Tomato	cytosol	60.21	84.23
GSMUA_Achr11P...	Banana	cytosol	81.91	82.62
GSMUA_Achr5P18030_001	Banana	cytosol	80.0	80.51
KRH63972	Soybean	cytosol	76.38	77.71
KRH40974	Soybean	cytosol, nucleus	76.17	77.66
VIT_07s0031g02680.t01	Wine grape	cytosol	77.66	75.88
CDY60036	Canola	cytosol	73.62	73.93
AT5G63610.1	Thale cress	cytosol	73.83	73.83
Bra037748.1-P	Field mustard	cytosol	73.4	73.72
CDX81189	Canola	cytosol, nucleus, plastid	67.87	73.33
KRH57887	Soybean	cytosol	35.74	71.19
HORVU4Hr1G085830.4	Barley	cytosol	29.15	40.18
HORVU6Hr1G013680.2	Barley	cytosol, plastid	28.51	36.22
HORVU7Hr1G051180.3	Barley	cytosol	24.04	33.83
HORVU5Hr1G046190.1	Barley	plastid	26.38	33.24
HORVU1Hr1G062980.2	Barley	cytosol	30.0	33.18
HORVU4Hr1G023490.7	Barley	endoplasmic reticulum, vacuole	26.17	32.45
HORVU5Hr1G120960.2	Barley	cytosol	26.38	28.12
HORVU6Hr1G068270.1	Barley	cytosol	24.68	25.16
HORVU0Hr1G016660.4	Barley	cytosol	24.68	25.16
HORVU7Hr1G008690.3	Barley	endoplasmic reticulum, plasma membrane	25.53	24.0
HORVU6Hr1G054600.5	Barley	nucleus	31.91	22.09
HORVU2Hr1G084400.1	Barley	nucleus	32.13	20.05

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.5	MapMan:15.3.3.4.3	MapMan:18.4.3.1.5	Gene3D:3.30.200.20	EMBL:AK368833
UniProt:F2DY65	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G051380	EnsemblPlants:HORVU1Hr1G051380.3
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002007A0F	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DY65]

Coordinates

chrchr1H:-:380778722..380784762

Molecular Weight (calculated)

52408.4 Da

IEP (calculated)

9.794

GRAVY (calculated)

-0.464

Length

470 amino acids

Sequence
(BLAST)

001: MGDGRGGGSN RPAWLQQYEL VGKIGEGTYG LVFLARLKPT HPQAAGRRGS PIAIKKFKQS KEGDGVSPTA IREIMLLREI NHENVVKLVN VHINHADMSL
101: YLAFDYAEHD LYEVIRHHRE KLNLSINQYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGEGEEHG IIKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGA KHYTSAVDMW AVGCIFAELL TLKPLFQGVE AKATPNPFQL DQLDKIFKVL GHPTVEKWPT LANLPCWQND QQHIQGHKYE NTGLHTIVHL
301: PQKGPAFDLL SRMLEYDPRK RITAAQALEH EYFRMDPLPG RNALVPSQPG EKIVAYPVRP VDTSTDFEGT TSLQPTQPPS GNGPPGGQPV PRQIPRQMQQ
401: PMGGMQRMPP GANMGAFGAA PQAGMVGMNP GNIPMQRGAG GQSHPHQLRR KADQGMQMQN PGYPQQKRRF

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.