CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90996	nucleus
KRG91429
KRG99255	endoplasmic reticulum
KRG99448	nucleus
KRH04529	nucleus
KRH04631	nucleus
KRH05060	nucleus
KRH16044	nucleus
KRH28363	nucleus
KRH28424	nucleus
KRH28480	nucleus
KRH35393
KRH35760	nucleus
KRH44391	nucleus
KRH45568	nucleus
KRH45743	endoplasmic reticulum
KRH47513	nucleus
KRH50258	nucleus
KRH52524	nucleus
KRH57804	nucleus
KRH57973	nucleus
KRH61850	nucleus
KRH69476	endoplasmic reticulum
KRH69654	nucleus
KRH71159	nucleus
KRH74510	nucleus
KRH74675	endoplasmic reticulum
KRH76992	nucleus
KRH77050	nucleus
KRH77118	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	KRH44391	AT1G15570.1	20407024
AT5G63610.1	KRH47513	AT1G15570.1	20407024
AT5G63610.1	KRG99255	AT1G70210.1	20407024
AT5G63610.1	KRH45743	AT1G70210.1	20407024
AT5G63610.1	KRH69476	AT1G70210.1	20407024
AT5G63610.1	KRH74675	AT1G70210.1	20407024
AT5G63610.1	KRH04631	AT3G19150.1	20407024
AT5G63610.1	KRH28480	AT3G19150.1	20407024
AT5G63610.1	KRH50258	AT3G19150.1	20407024
AT5G63610.1	KRH57804	AT3G19150.1	20407024
AT5G63610.1	KRH71159	AT3G19150.1	20407024
AT5G63610.1	KRH76992	AT3G19150.1	20407024
AT5G63610.1	KRH04529	AT3G50070.1	20407024
AT5G63610.1	KRH28424	AT3G50070.1	20407024
AT5G63610.1	KRH57973	AT3G50070.1	20407024
AT5G63610.1	KRH77050	AT3G50070.1	20407024
AT5G63610.1	KRG90996	AT4G34160.1	20407024
AT5G63610.1	KRH35760	AT4G34160.1	20407024
AT5G63610.1	KRH28363	AT4G37630.1	20407024
AT5G63610.1	KRH77118	AT4G37630.1	20407024
AT5G63610.1	KRG99448	AT5G10440.1	20407024
AT5G63610.1	KRH45568	AT5G10440.1	20407024
AT5G63610.1	KRH69654	AT5G10440.1	20407024
AT5G63610.1	KRH74510	AT5G10440.1	20407024
AT5G63610.1	KRH05060	AT5G11300.1	20407024
AT5G63610.1	KRH16044	AT5G11300.1	20407024
AT5G63610.1	KRH52524	AT5G11300.1	20407024
AT5G63610.1	KRH61850	AT5G11300.1	20407024
AT5G63610.1	KRG91429	AT5G51910.1	21798944
AT5G63610.1	KRH35393	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g027870.1.1	Tomato	cytosol	86.45	79.76
KRH57887	Soybean	cytosol	60.0	78.81
KRH40974	Soybean	cytosol, nucleus	98.39	66.16
KRH63972	Soybean	cytosol	90.32	60.61
VIT_07s0031g02680.t01	Wine grape	cytosol	87.1	56.13
TraesCS1D01G201600.1	Wheat	cytosol	84.84	55.96
TraesCS1A01G198100.2	Wheat	cytosol	84.84	55.96
HORVU1Hr1G051380.3	Barley	cytosol	84.84	55.96
GSMUA_Achr11P...	Banana	cytosol	83.87	55.79
CDY60036	Canola	cytosol	84.19	55.77
Bra037748.1-P	Field mustard	cytosol	84.19	55.77
TraesCS1B01G212800.1	Wheat	cytosol	84.52	55.74
AT5G63610.1	Thale cress	cytosol	84.52	55.74
Os10t0580300-01	Rice	cytosol, plasma membrane	85.16	55.58
OQU92050	Sorghum	cytosol	84.19	55.41
GSMUA_Achr5P18030_001	Banana	cytosol	83.23	55.25
Zm00001d014438_P001	Maize	cytosol	83.55	54.99
CDX81189	Canola	cytosol, nucleus, plastid	76.13	54.25
KRH36887	Soybean	cytosol, nucleus	38.39	40.48
KRH11866	Soybean	cytosol, nucleus	38.39	40.48
KRH42252	Soybean	cytosol	37.74	39.8
KRH58370	Soybean	cytosol	37.74	39.0
KRH47306	Soybean	cytosol, nucleus, plasma membrane	38.06	37.58
KRH48128	Soybean	cytosol	37.42	36.83
KRH37522	Soybean	cytosol	37.42	36.59
KRH06014	Soybean	cytosol	36.45	35.99
KRH17547	Soybean	cytosol	36.77	33.83
KRH13011	Soybean	cytosol	33.23	31.31
KRH26046	Soybean	cytosol	29.68	31.19
KRH41782	Soybean	cytosol, nucleus	36.45	31.13
KRH57208	Soybean	cytosol	20.0	29.25
KRH44859	Soybean	cytosol	31.29	29.04
KRH60482	Soybean	cytosol	36.13	27.38
KRH39114	Soybean	nucleus	34.84	26.28
KRH48600	Soybean	cytosol	32.26	24.94
KRH66138	Soybean	cytosol	32.26	22.99
KRH07433	Soybean	cytosol	31.94	22.76
KRH76377	Soybean	cytosol	32.9	22.67
KRH39665	Soybean	cytosol	33.23	22.64
KRH07697	Soybean	nucleus	32.58	22.39
KRH07201	Soybean	cytosol	29.03	21.63
KRH57202	Soybean	nucleus	39.03	21.01
KRH03917	Soybean	nucleus	38.06	20.63
KRG97452	Soybean	nucleus	36.77	18.21
KRH42643	Soybean	nucleus	40.0	16.64
KRH58745	Soybean	nucleus	40.0	16.62
KRH31446	Soybean	nucleus	39.35	16.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.5	MapMan:15.3.3.4.3	MapMan:18.4.3.1.5	Gene3D:3.30.200.20	UniProt:A0A0R0K2W6
EMBL:ACUP02003336	EnsemblPlantsGene:GLYMA_05G1953001	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
ProteinID:KRH59625.1	EnsemblPlants:KRH59626	ProteinID:KRH59626	ProteinID:KRH59626.1	ProteinID:KRH59627.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0006EDE7AA	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:37964301..37967526

Molecular Weight (calculated)

35045.4 Da

IEP (calculated)

8.412

GRAVY (calculated)

-0.198

Length

310 amino acids

Sequence
(BLAST)

001: MGDGSGSRWS RAEWVQQYDL LGKIGEGTYG LVFLARTKSP VGTPSKSIAI KKFKQSKDGD GVSPTAIREI MLLREITHEN VVKLVNVHIN HADMSLYLAF
101: DYAEHDLYEI IRHHRDKLNH SINQYTVKSL LWQLLNGLSY LHSNWMIHRD LKPSNILVMG EGEEHGVVKI ADFGLARIYQ APLKPLSDNG VVVTIWYRAP
201: ELLLGAKHYT SAVDMWAMGC IFAELLTLKP LFQGAEVKAT SNPFQLDQLD KIFKVLGHPT LEKWPSLASL PHWQQDVQHI QGHKYDNAGL YNVVHLSPKS
301: PAYDLLSKML

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.