Factsheet for Zm00001d014438_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003439_P001	nucleus
Zm00001d005293_P001	nucleus, nucleus
Zm00001d006165_P001
Zm00001d013728_P001	nucleus
Zm00001d014756_P006	nucleus
Zm00001d018128_P001	nucleus
Zm00001d019696_P001	nucleus, nucleus
Zm00001d020353_P001	endoplasmic reticulum
Zm00001d023732_P002	nucleus
Zm00001d028092_P001	nucleus
Zm00001d030894_P002	nucleus
Zm00001d031725_P001
Zm00001d033330_P001	nucleus
Zm00001d041345_P001	nucleus
Zm00001d048143_P003	nucleus
Zm00001d052185_P001	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	Zm00001d014756_P006	AT1G15570.1	20407024
AT5G63610.1	Zm00001d023732_P002	AT1G15570.1	20407024
AT5G63610.1	Zm00001d020353_P001	AT1G70210.1	20407024
AT5G63610.1	Zm00001d005293_P001	AT3G50070.1	20407024
AT5G63610.1	Zm00001d019696_P001	AT3G50070.1	20407024
AT5G63610.1	Zm00001d005293_P001	AT4G34160.1	20407024
AT5G63610.1	Zm00001d019696_P001	AT4G34160.1	20407024
AT5G63610.1	Zm00001d003439_P001	AT4G37630.1	20407024
AT5G63610.1	Zm00001d013728_P001	AT4G37630.1	20407024
AT5G63610.1	Zm00001d028092_P001	AT4G37630.1	20407024
AT5G63610.1	Zm00001d030894_P002	AT4G37630.1	20407024
AT5G63610.1	Zm00001d033330_P001	AT4G37630.1	20407024
AT5G63610.1	Zm00001d041345_P001	AT4G37630.1	20407024
AT5G63610.1	Zm00001d048143_P003	AT4G37630.1	20407024
AT5G63610.1	Zm00001d018128_P001	AT5G10440.1	20407024
AT5G63610.1	Zm00001d052185_P001	AT5G10440.1	20407024
AT5G63610.1	Zm00001d006165_P001	AT5G51910.1	21798944
AT5G63610.1	Zm00001d031725_P001	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92050	Sorghum	cytosol	97.03	97.03
Os10t0580300-01	Rice	cytosol, plasma membrane	90.66	89.89
TraesCS1D01G201600.1	Wheat	cytosol	89.6	89.79
TraesCS1A01G198100.2	Wheat	cytosol	89.6	89.79
HORVU1Hr1G051380.3	Barley	cytosol	89.38	89.57
TraesCS1B01G212800.1	Wheat	cytosol	89.38	89.57
Solyc12g027870.1.1	Tomato	cytosol	60.08	84.23
KRH59626	Soybean	cytosol	54.99	83.55
GSMUA_Achr11P...	Banana	cytosol	80.04	80.9
GSMUA_Achr5P18030_001	Banana	cytosol	78.77	79.44
KRH40974	Soybean	cytosol, nucleus	75.16	76.79
KRH63972	Soybean	cytosol	75.16	76.62
VIT_07s0031g02680.t01	Wine grape	cytosol	78.13	76.51
AT5G63610.1	Thale cress	cytosol	73.04	73.19
CDY60036	Canola	cytosol	72.61	73.08
Bra037748.1-P	Field mustard	cytosol	72.4	72.86
CDX81189	Canola	cytosol, nucleus, plastid	66.88	72.41
KRH57887	Soybean	cytosol	35.03	69.92
Zm00001d053930_P001	Maize	cytosol	29.09	46.92
Zm00001d048497_P002	Maize	cytosol	29.51	45.87
Zm00001d046912_P001	Maize	cytosol, mitochondrion, peroxisome	27.18	39.38
Zm00001d031485_P001	Maize	mitochondrion	26.96	38.6
Zm00001d044672_P005	Maize	cytosol	26.33	37.46
Zm00001d027373_P003	Maize	cytosol	29.09	37.33
Zm00001d038109_P002	Maize	cytosol	29.72	32.56
Zm00001d010476_P001	Maize	cytosol	29.3	32.24
Zm00001d034834_P009	Maize	cytosol	27.6	30.66
Zm00001d000169_P009	Maize	cytosol	25.9	26.29
Zm00001d035964_P001	Maize	cytosol	25.9	25.96
Zm00001d017729_P023	Maize	cytosol	26.33	25.31
Zm00001d017128_P002	Maize	nucleus	31.42	22.29
Zm00001d003222_P016	Maize	nucleus	31.63	21.35
Zm00001d025739_P006	Maize	nucleus	31.42	20.56

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100284562	MapMan:13.1.1.2.5	MapMan:15.3.3.4.3	MapMan:18.4.3.1.5	Gene3D:3.30.200.20
ProteinID:AQK66278.1	UniProt:B6TV49	EMBL:EU968864	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0051301	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000182DAC5	EnsemblPlantsGene:Zm00001d014438	EnsemblPlants:Zm00001d014438_P001
EnsemblPlants:Zm00001d014438_T001	SEG:seg	:	:	:	:

Description

cyclin dependent kinase8 cyclin dependent kinase8

Coordinates

chr5:-:46913470..46918669

Molecular Weight (calculated)

52507.6 Da

IEP (calculated)

9.787

GRAVY (calculated)

-0.442

Length

471 amino acids

Sequence
(BLAST)

001: MGDGRTGGAN RPAWLQQYEL IGKIGEGTYG LVFLARLKPP HPAPGRRGPP IAIKKFKQSK EGDGVSPTAI REIMLLREIN HENVVKLVNV HINHADMSLY
101: LAFDYAEHDL YEIIRHHREK LSSSINPYTV KSLLWQLLNG LNYLHSNWII HRDLKPSNIL VMGEGDEHGI IKIADFGLAR IYQAPLKPLC DNGVVVTIWY
201: RAPELLLGGK HYTSAVDMWA VGCIFAELLT LKPLFQGVEA KNPPNPFQLD QLDKIFKVLG HPTVEKWPTL ANLPWWQNDH QHIQGHKYEN PGFHNIVHLP
301: PKSPAFDLLS KMLEYDPRKR ITAAQALEHE YFRMDPLPGR NALLPSQPGE KIVQYPIRPV DTTTDFEGTT SLQPTQPPSG NAPPGGQSVA RPMPRQMPQQ
401: PMVGGIPRVA GGVTMAAFNA ASQAGMAGLN PGNMPMQRGA GGQSHPHQLR RKADQGMGMQ NPGYPQQKRR F

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.