CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91226	nucleus
EER92677	nucleus
EER96424	nucleus, nucleus
EER99015	nucleus
EER99208
EES07560	nucleus
EES17294	nucleus
KXG19603	nucleus
KXG23504	nucleus
OQU77084	nucleus
OQU80770
OQU89443	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	KXG23504	AT1G15570.1	20407024
AT5G63610.1	OQU77084	AT1G15570.1	20407024
AT5G63610.1	OQU89443	AT1G70210.1	20407024
AT5G63610.1	EER99015	AT3G19150.1	20407024
AT5G63610.1	EER96424	AT3G50070.1	20407024
AT5G63610.1	EER96424	AT4G34160.1	20407024
AT5G63610.1	EER91226	AT4G37630.1	20407024
AT5G63610.1	EER92677	AT4G37630.1	20407024
AT5G63610.1	EES17294	AT4G37630.1	20407024
AT5G63610.1	EES07560	AT5G10440.1	20407024
AT5G63610.1	KXG19603	AT5G10440.1	20407024
AT5G63610.1	EER99208	AT5G51910.1	21798944
AT5G63610.1	OQU80770	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014438_P001	Maize	cytosol	97.03	97.03
TraesCS1D01G201600.1	Wheat	cytosol	90.87	91.06
TraesCS1A01G198100.2	Wheat	cytosol	90.87	91.06
Os10t0580300-01	Rice	cytosol, plasma membrane	91.72	90.95
HORVU1Hr1G051380.3	Barley	cytosol	90.66	90.85
TraesCS1B01G212800.1	Wheat	cytosol	90.66	90.85
Solyc12g027870.1.1	Tomato	cytosol	60.93	85.42
KRH59626	Soybean	cytosol	55.41	84.19
GSMUA_Achr11P...	Banana	cytosol	80.68	81.55
GSMUA_Achr5P18030_001	Banana	cytosol	79.83	80.51
KRH63972	Soybean	cytosol	76.65	78.14
KRH40974	Soybean	cytosol, nucleus	76.43	78.09
VIT_07s0031g02680.t01	Wine grape	cytosol	78.77	77.13
Bra037748.1-P	Field mustard	cytosol	73.25	73.72
AT5G63610.1	Thale cress	cytosol	73.46	73.62
CDY60036	Canola	cytosol	73.04	73.5
CDX81189	Canola	cytosol, nucleus, plastid	67.3	72.87
KRH57887	Soybean	cytosol	35.03	69.92
EES04403	Sorghum	cytosol	29.72	47.78
KXG40336	Sorghum	cytosol	29.3	46.94
EES15619	Sorghum	cytosol	26.33	40.26
EER90152	Sorghum	cytosol, mitochondrion, peroxisome	27.39	39.69
EES18176	Sorghum	cytosol	30.36	33.41
OQU80908	Sorghum	mitochondrion	27.18	30.33
KXG37128	Sorghum	cytosol	26.75	29.3
EER87741	Sorghum	cytosol	26.54	26.43
EES07406	Sorghum	cytosol	25.48	26.32
EES12419	Sorghum	nucleus	31.42	21.39
EES05381	Sorghum	nucleus	30.57	21.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.5	MapMan:15.3.3.4.3	MapMan:18.4.3.1.5	Gene3D:3.30.200.20	EntrezGene:8086278
UniProt:A0A1Z5S7Z2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EnsemblPlants:OQU92050	ProteinID:OQU92050	ProteinID:OQU92050.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3001G281600	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8237F	RefSeq:XP_002464856.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:55224357..55229298

Molecular Weight (calculated)

52382.4 Da

IEP (calculated)

9.787

GRAVY (calculated)

-0.434

Length

471 amino acids

Sequence
(BLAST)

001: MGDGRAGGAN RPAWLQQYEL IGKIGEGTYG LVFLARLKPS HPAPGRRGPP IAIKKFKQSK EGDGVSPTAI REIMLLREIN HENVVKLVNV HINHADMSLY
101: LAFDYAEHDL YEIIRHHREK LSSSINPYTV KSLLWQLLNG LNYLHSNWII HRDLKPSNIL VMGEGDEHGI IKIADFGLAR IYQAPLKPLC DNGVVVTIWY
201: RAPELLLGGK HYTSAVDMWA VGCIFAELLT LKPLFQGVEA KNTPNPFQLD QLDKIFKVLG HPTVEKWPTL ANLPWWQNDQ QHIQGHKYDN PGLHNIVHLP
301: PKSPAFDLLS KMLEYDPRKR ITAAQALEHE YFRMEPLPGR NALLPSQPGE KIVPYPVRPV DTTTDFEGTT SLQPTQPPSG NAPPGGQSVA RPMPRQMPQQ
401: PMVGGMPRVA AGANMAAFNA ASQAGMAGLN PGNIPMQRGA GGQSHPHQLR RKADQGMGMQ NPGYPQQKRR F

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.