Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G201600.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS1B01G212800.1 | Wheat | cytosol | 99.79 | 99.79 |
| HORVU1Hr1G051380.3 | Barley | cytosol | 99.57 | 99.57 |
| Os10t0580300-01 | Rice | cytosol, plasma membrane | 93.62 | 92.63 |
| OQU92050 | Sorghum | cytosol | 91.06 | 90.87 |
| Zm00001d014438_P001 | Maize | cytosol | 89.79 | 89.6 |
| KRH59626 | Soybean | cytosol | 55.96 | 84.84 |
| Solyc12g027870.1.1 | Tomato | cytosol | 60.21 | 84.23 |
| GSMUA_Achr11P... | Banana | cytosol | 82.13 | 82.83 |
| GSMUA_Achr5P18030_001 | Banana | cytosol | 80.21 | 80.73 |
| KRH63972 | Soybean | cytosol | 76.6 | 77.92 |
| KRH40974 | Soybean | cytosol, nucleus | 76.38 | 77.87 |
| VIT_07s0031g02680.t01 | Wine grape | cytosol | 77.87 | 76.09 |
| CDY60036 | Canola | cytosol | 73.83 | 74.15 |
| AT5G63610.1 | Thale cress | cytosol | 74.04 | 74.04 |
| Bra037748.1-P | Field mustard | cytosol | 73.62 | 73.93 |
| CDX81189 | Canola | cytosol, nucleus, plastid | 68.09 | 73.56 |
| KRH57887 | Soybean | cytosol | 35.74 | 71.19 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 28.94 | 46.26 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 28.51 | 45.73 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 26.81 | 40.78 |
| TraesCS5A01G145500.1 | Wheat | cytosol | 25.96 | 40.13 |
| TraesCS7A01G248700.1 | Wheat | cytosol | 26.6 | 38.34 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 30.21 | 33.49 |
| TraesCS4A01G336800.2 | Wheat | cytosol | 27.02 | 28.54 |
| TraesCS6A01G269400.1 | Wheat | cytosol | 25.32 | 25.87 |
| TraesCS4A01G434800.1 | Wheat | cytosol | 25.74 | 25.0 |
| TraesCS7A01G049000.1 | Wheat | cytosol | 25.53 | 24.39 |
| TraesCS6A01G214100.1 | Wheat | nucleus | 31.7 | 22.07 |
| TraesCS2A01G346500.1 | Wheat | nucleus | 32.13 | 20.8 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.5 | MapMan:15.3.3.4.3 | MapMan:18.4.3.1.5 | Gene3D:3.30.200.20 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF92 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS1A01G198100 | EnsemblPlants:TraesCS1A01G198100.2 | TIGR:cd07842 | SEG:seg |
Description
No Description!
Coordinates
chr1A:-:355730633..355735246
Molecular Weight (calculated)
52367.4 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.463
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDGRGGGSN RPAWLQQYEL VGKIGEGTYG LVFLARLKPT HPQAAGRRGS PIAIKKFKQS KEGDGVSPTA IREIMLLREI NHENVVKLVN VHINHADMSL
101: YLAFDYAEHD LYEVIRHHRE KLNLSINQYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGEGEEHG IIKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGA KHYTSAVDMW AVGCIFAELL TLKPLFQGVE AKATPNPFQL DQLDKIFKVL GHPTVEKWPT LANLPCWQND QQHIQGHKYE NTGLHTIVHL
301: PQKGPAFDLL SRMLEYDPRK RITAAQALEH EYFRMDPLPG RNALVPSQPG EKIVTYPVRP VDTSTDFEGT TSLQPTQPPS GNGPPGGQPV PRQIPRQMQQ
401: PMGGMQRMPP GANMGAFGAA PQAGMVGMNP GNIPMQRGAG GQSHPHQLRR KADQGMGMQN PGYPQQKRRF
101: YLAFDYAEHD LYEVIRHHRE KLNLSINQYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGEGEEHG IIKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGA KHYTSAVDMW AVGCIFAELL TLKPLFQGVE AKATPNPFQL DQLDKIFKVL GHPTVEKWPT LANLPCWQND QQHIQGHKYE NTGLHTIVHL
301: PQKGPAFDLL SRMLEYDPRK RITAAQALEH EYFRMDPLPG RNALVPSQPG EKIVTYPVRP VDTSTDFEGT TSLQPTQPPS GNGPPGGQPV PRQIPRQMQQ
401: PMGGMQRMPP GANMGAFGAA PQAGMVGMNP GNIPMQRGAG GQSHPHQLRR KADQGMGMQN PGYPQQKRRF
001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL
Arabidopsis Description
CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.