Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G121200.2 | Wheat | cytosol | 99.35 | 99.35 |
| TraesCS4B01G123100.1 | Wheat | cytosol | 98.71 | 98.71 |
| Os01t0897000-01 | Rice | cytosol | 87.38 | 89.11 |
| TraesCS5A01G145500.1 | Wheat | cytosol | 86.41 | 87.83 |
| EES15619 | Sorghum | cytosol | 83.82 | 84.09 |
| GSMUA_Achr11P... | Banana | cytosol | 81.88 | 83.5 |
| PGSC0003DMT400071215 | Potato | cytosol | 78.64 | 80.2 |
| Solyc10g074720.1.1 | Tomato | cytosol, nucleus | 77.67 | 79.21 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 96.76 | 78.89 |
| VIT_08s0056g00210.t01 | Wine grape | cytosol | 76.7 | 78.22 |
| Zm00001d044672_P005 | Maize | cytosol | 82.52 | 77.04 |
| CDY07716 | Canola | cytosol | 75.4 | 75.4 |
| Bra000077.1-P | Field mustard | cytosol, nucleus, plasma membrane | 75.08 | 74.36 |
| AT2G38620.2 | Thale cress | cytosol | 74.76 | 74.28 |
| KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 75.4 | 74.2 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 74.43 | 74.19 |
| AT3G54180.1 | Thale cress | cytosol | 74.11 | 74.11 |
| CDX76164 | Canola | cytosol | 72.82 | 74.01 |
| Bra014835.1-P | Field mustard | cytosol | 72.82 | 74.01 |
| CDY13189 | Canola | cytosol | 72.49 | 73.68 |
| GSMUA_Achr4P02420_001 | Banana | cytosol | 56.31 | 72.2 |
| TraesCS7A01G248700.1 | Wheat | cytosol | 66.02 | 62.58 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 55.02 | 58.02 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 54.37 | 57.14 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 38.51 | 28.07 |
| TraesCS1A01G198100.2 | Wheat | cytosol | 40.78 | 26.81 |
| TraesCS4A01G336800.2 | Wheat | cytosol | 33.33 | 23.15 |
| TraesCS4A01G434800.1 | Wheat | cytosol | 34.63 | 22.11 |
| TraesCS6A01G269400.1 | Wheat | cytosol | 32.69 | 21.96 |
| TraesCS7A01G049000.1 | Wheat | cytosol | 34.3 | 21.54 |
| TraesCS6A01G214100.1 | Wheat | nucleus | 40.13 | 18.37 |
| TraesCS2A01G346500.1 | Wheat | nucleus | 41.75 | 17.77 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF11 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS4A01G192300 | EnsemblPlants:TraesCS4A01G192300.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4A:+:472918003..472921049
Molecular Weight (calculated)
34766.3 Da
IEP (calculated)
8.958
GRAVY (calculated)
-0.204
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKYEKLEKV GEGTYGKVYK AQDKATGQVV ALKKTRLEMD DEGIPPTALR EISLLRLLSS SLYVVRLLAV EQATKGGGAG SGGKPVLYLV FEFLDTDLKK
101: FVDAYRRGPA PKPLPTQVVK SFLYQLCKGI AHCHGHGVLH RDLKPQNLLV DKEKMILKIA DLGLSRAFTV PMKSYTHEIV TLWYRAPEVL LGATHYSTSV
201: DIWSIGCIFA EMVRKQALFP GDSELQQLLH IFKLLGTPTE EDWPGVTALR DWHEFPQWKA QRLTRAVPTL EPEGIDLLSK MLQFDPANRI SAKATLEHPY
301: FNSLDKSQF
101: FVDAYRRGPA PKPLPTQVVK SFLYQLCKGI AHCHGHGVLH RDLKPQNLLV DKEKMILKIA DLGLSRAFTV PMKSYTHEIV TLWYRAPEVL LGATHYSTSV
201: DIWSIGCIFA EMVRKQALFP GDSELQQLLH IFKLLGTPTE EDWPGVTALR DWHEFPQWKA QRLTRAVPTL EPEGIDLLSK MLQFDPANRI SAKATLEHPY
301: FNSLDKSQF
001: MEKYEKLEKV GEGTYGKVYK AMEKTTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVIQSKDST VSHSPKSNLY LVFEYLDTDL
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRYLLLV FDANVYVYRN QFRTLAH
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRYLLLV FDANVYVYRN QFRTLAH
Arabidopsis Description
CDKB1-2Cyclin-dependent kinase B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q2V419]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.