CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07716	Canola	cytosol	98.39	98.71
Bra000077.1-P	Field mustard	cytosol, nucleus, plasma membrane	98.71	98.08
AT2G38620.2	Thale cress	cytosol	91.94	91.64
CDX76164	Canola	cytosol	85.48	87.17
CDY13189	Canola	cytosol	84.84	86.51
Solyc10g074720.1.1	Tomato	cytosol, nucleus	82.9	84.82
VIT_08s0056g00210.t01	Wine grape	cytosol	82.58	84.49
PGSC0003DMT400071215	Potato	cytosol	82.58	84.49
KRH47306	Soybean	cytosol, nucleus, plasma membrane	82.9	81.85
GSMUA_Achr11P...	Banana	cytosol	79.68	81.52
Os01t0897000-01	Rice	cytosol	79.35	81.19
TraesCS5D01G147100.1	Wheat	cytosol	77.42	78.95
TraesCS5B01G144100.2	Wheat	cytosol	77.42	78.95
TraesCS5A01G145500.1	Wheat	cytosol	76.45	77.96
EES15619	Sorghum	cytosol	76.77	77.27
TraesCS4A01G192300.1	Wheat	cytosol	74.19	74.43
TraesCS4B01G123100.1	Wheat	cytosol	74.19	74.43
TraesCS4D01G121200.2	Wheat	cytosol	74.19	74.43
Zm00001d044672_P005	Maize	cytosol	77.1	72.21
GSMUA_Achr4P02420_001	Banana	cytosol	56.13	72.2
HORVU5Hr1G046190.1	Barley	plastid	77.1	64.08
CDX87588	Canola	cytosol	63.87	63.26
CDY01345	Canola	cytosol	64.19	62.97
CDY31856	Canola	cytosol	64.19	62.97
CDX88294	Canola	cytosol	63.55	62.94
HORVU4Hr1G023490.7	Barley	endoplasmic reticulum, vacuole	74.19	60.69
CDX68497	Canola	cytosol	54.52	57.48
CDX83047	Canola	cytosol	54.52	54.17
CDX87018	Canola	cytosol	40.97	53.59
CDY66197	Canola	cytosol	55.16	50.59
CDY05870	Canola	cytosol, plastid	54.52	44.59
CDX96131	Canola	cytosol	41.61	37.18
CDY36228	Canola	cytosol	41.61	37.18
CDY45733	Canola	cytosol, plastid, vacuole	17.74	36.18
CDY69065	Canola	cytosol	17.74	36.18
CDX87784	Canola	cytosol	28.39	33.08
CDY60132	Canola	cytosol	40.97	31.99
CDX73001	Canola	cytosol	40.97	31.99
CDY21722	Canola	cytosol	40.0	31.88
CDX81858	Canola	cytosol	39.35	31.36
CDX96739	Canola	cytosol	39.35	31.04
CDX83876	Canola	cytosol	38.71	30.38
CDY67496	Canola	cytosol	30.65	30.06
CDY60036	Canola	cytosol	40.65	26.92
CDX81189	Canola	cytosol, nucleus, plastid	36.45	25.98
CDY38979	Canola	cytosol	35.16	24.89
CDY09272	Canola	cytosol	35.81	24.08
CDX76497	Canola	cytosol	35.48	23.86
CDY01580	Canola	cytosol	34.84	23.43
CDY13047	Canola	cytosol	34.52	23.01
CDY39427	Canola	cytosol	35.16	22.71
CDY37922	Canola	nucleus	38.39	22.45
CDY49306	Canola	cytosol	34.52	22.38
CDY56886	Canola	nucleus	34.52	20.9
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	34.84	19.18
CDY01821	Canola	nucleus	42.9	19.08
CDX96081	Canola	nucleus	43.23	18.9
CDX87783	Canola	extracellular, mitochondrion	0.0	0.0
CDY26373	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.2	MapMan:18.4.3.1.2	Gene3D:3.30.200.20	GO:A0A078JCM4	UniProt:A0A078JCM4
EnsemblPlants:CDY62439	ProteinID:CDY62439	ProteinID:CDY62439.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00036272001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF11	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDAD4B	SEG:seg	:	:

Description

BnaC03g72210DBnaC03g72210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCM4]

Coordinates

chrLK034143:-:33630..34926

Molecular Weight (calculated)

35397.8 Da

IEP (calculated)

7.654

GRAVY (calculated)

-0.290

Length

310 amino acids

Sequence
(BLAST)

001: MDKYEKLEKV GEGTYGKVYK AMEKDTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVLQSKDSS SSSQKSNLYL VFEYLDTDLK
101: KFVDSYRKGA NPRPLEADLV TRFMFQLCKG VAHCHSHGVL HRDLKPQNLL LDKERGILKI ADLGLGRAFT VPLKSYTHEI VTLWYRAPEV LLGSTHYSTG
201: VDMWSVGCIF AEMIRRQALF PGDSEFQQLL HIFRLLGTPT EKQWPGVMTL RDWHVYPKWE PQDLSSAVPS LSPEGVDLLT NMLRYNPAER ISAKAALDHP
301: YFDSLDKSQF

Best Arabidopsis Sequence Match ( AT2G38620.2 )
(BLAST)

001: MEKYEKLEKV GEGTYGKVYK AMEKTTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVIQSKDST VSHSPKSNLY LVFEYLDTDL
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRLLGTP TEQQWPGVMA LRDWHVYPKW EPQDLSRAVP SLSPEGIDLL TQMLKYNPAE RISAKAALDH
301: PYFDSLDKSQ F

Arabidopsis Description

CDKB1-2Cyclin-dependent kinase B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q2V419]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.