CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 2
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26373	Canola	mitochondrion	73.73	97.75
CDY13047	Canola	cytosol	57.63	14.62
CDY38979	Canola	cytosol	50.0	13.47
CDY39427	Canola	cytosol	50.85	12.5
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	56.78	11.9
CDY01580	Canola	cytosol	33.05	8.46
CDY09272	Canola	cytosol	33.05	8.46
CDX76497	Canola	cytosol	32.2	8.24
CDX81858	Canola	cytosol	5.08	1.54
CDY21722	Canola	cytosol	5.08	1.54
CDX96739	Canola	cytosol	5.08	1.53
CDX83876	Canola	cytosol	5.08	1.52
CDY49306	Canola	cytosol	5.93	1.46
CDX81189	Canola	cytosol, nucleus, plastid	5.08	1.38
CDY60036	Canola	cytosol	5.08	1.28
CDY60132	Canola	cytosol	3.39	1.01
CDX73001	Canola	cytosol	3.39	1.01
CDY69065	Canola	cytosol	0.85	0.66
CDY45733	Canola	cytosol, plastid, vacuole	0.85	0.66
CDY01821	Canola	nucleus	3.39	0.57
CDX96081	Canola	nucleus	3.39	0.56
CDX87784	Canola	cytosol	0.85	0.38
CDY56886	Canola	nucleus	0.85	0.2
CDY37922	Canola	nucleus	0.85	0.19
CDX88294	Canola	cytosol	0.0	0.0
CDY13189	Canola	cytosol	0.0	0.0
CDY31856	Canola	cytosol	0.0	0.0
CDY36228	Canola	cytosol	0.0	0.0
CDX96131	Canola	cytosol	0.0	0.0
CDX87588	Canola	cytosol	0.0	0.0
CDX87018	Canola	cytosol	0.0	0.0
CDY01345	Canola	cytosol	0.0	0.0
CDX83047	Canola	cytosol	0.0	0.0
CDY07716	Canola	cytosol	0.0	0.0
CDX76164	Canola	cytosol	0.0	0.0
CDX68497	Canola	cytosol	0.0	0.0
CDY62439	Canola	cytosol, nucleus, plasma membrane	0.0	0.0
CDY66197	Canola	cytosol	0.0	0.0
CDY67496	Canola	cytosol	0.0	0.0
CDY05870	Canola	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDX87783	EnsemblPlantsGene:GSBRNA2T00146882001	ProteinID:CDX87783	ProteinID:CDX87783.1	SEG:seg	UniParc:UPI0004EF4936
MapMan:35.2	:	:	:	:	:

Description

BnaC02g31660D

Coordinates

chrLK031851:-:1412150..1412781

Molecular Weight (calculated)

13334.3 Da

IEP (calculated)

11.724

GRAVY (calculated)

-0.536

Length

118 amino acids

Sequence
(BLAST)

001: MQRQMVLLLA LVRPSGIWRQ HGTTKPWEVI MSEMLSIYHR LEGRVLGTSM NMNKKWVFPR GPSDTADKLA NAVVGGGRWS QSQRQQQPAM KAGWVGESGD
101: MFLRPTQPPN PYSRRIAG

Best Arabidopsis Sequence Match ( AT5G45430.1 )
(BLAST)

001: MERYTLLKEV GDGTFGNVWR AVNKQTNEVV AIKRMKKKYF SWEECVNLRE VKSLSRMNHP NIVKLKEVIR ENDILYFVFE YMECNLYQLM KDRPKHFAES
101: DIRNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDVIKI ADLGLAREID SSPPYTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMA ELLSLRPLFP
201: GASEADEIYK ICSVIGSPTE ETWLEGLNLA SVINYQFPQF PGVHLSSVMP YASADAVNLI ERLCSWDPCN RPTTAEALQH PFFQSCYYIP PSLRPKLSEP
301: RGSLEQQQSV KRLPAAPTYN ANKPLNTYVT PKTNAPFSNG VNSYVTPKTN APFSNGVNSY VTAKTNAPFS NGVNNYVAPK MNAPFDNGAT QQKVDTTNNN
401: NQNTAWNNKP VRSYNVKDSK YRPPGRKSPL AASMEKNWVF SRGASETANK LANATIGGRW TQSQRQQQPA MKAGWVGESG DMFLRPTQPS NPYSRKIAG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H0X4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.