Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018036.1-P | Field mustard | cytosol | 86.98 | 100.0 |
| CDX68497 | Canola | cytosol | 84.02 | 96.6 |
| AT3G48750.1 | Thale cress | cytosol | 83.73 | 96.26 |
| CDX87018 | Canola | cytosol | 65.98 | 94.09 |
| CDX83047 | Canola | cytosol | 85.21 | 92.31 |
| VIT_15s0045g00310.t01 | Wine grape | cytosol | 75.74 | 87.07 |
| TraesCS6B01G105100.1 | Wheat | cytosol | 73.37 | 84.64 |
| KRH42252 | Soybean | cytosol | 73.37 | 84.35 |
| KRH36887 | Soybean | cytosol, nucleus | 73.37 | 84.35 |
| KRH11866 | Soybean | cytosol, nucleus | 73.37 | 84.35 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 73.08 | 84.3 |
| CDY05870 | Canola | cytosol, plastid | 93.2 | 83.11 |
| Zm00001d053930_P001 | Maize | cytosol | 71.6 | 82.88 |
| KRH58370 | Soybean | cytosol | 73.37 | 82.67 |
| GSMUA_Achr11P... | Banana | cytosol | 68.64 | 82.56 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 71.3 | 81.97 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 71.3 | 81.97 |
| EES04403 | Sorghum | cytosol | 70.12 | 80.89 |
| KXG40336 | Sorghum | cytosol | 68.05 | 78.23 |
| Solyc08g066330.1.1 | Tomato | cytosol | 70.71 | 77.85 |
| Zm00001d048497_P002 | Maize | cytosol | 69.53 | 77.56 |
| TraesCS4D01G347600.1 | Wheat | cytosol | 71.3 | 73.7 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 71.89 | 71.26 |
| PGSC0003DMT400077428 | Potato | cytosol | 62.43 | 70.81 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 73.67 | 67.3 |
| Os02t0123100-01 | Rice | mitochondrion | 73.08 | 65.69 |
| Zm00001d027373_P003 | Maize | cytosol | 70.41 | 64.85 |
| CDY67496 | Canola | cytosol | 52.07 | 55.7 |
| CDY13189 | Canola | cytosol | 50.0 | 55.59 |
| CDX76164 | Canola | cytosol | 49.7 | 55.26 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 50.59 | 55.16 |
| CDY07716 | Canola | cytosol | 50.3 | 55.02 |
| CDX88294 | Canola | cytosol | 47.63 | 51.44 |
| CDY31856 | Canola | cytosol | 47.34 | 50.63 |
| CDY01345 | Canola | cytosol | 47.34 | 50.63 |
| CDX87588 | Canola | cytosol | 46.75 | 50.48 |
| CDY45733 | Canola | cytosol, plastid, vacuole | 19.82 | 44.08 |
| CDY69065 | Canola | cytosol | 19.82 | 44.08 |
| CDY36228 | Canola | cytosol | 42.01 | 40.92 |
| CDX96131 | Canola | cytosol | 42.01 | 40.92 |
| CDX73001 | Canola | cytosol | 42.6 | 36.27 |
| CDY60132 | Canola | cytosol | 42.6 | 36.27 |
| CDY21722 | Canola | cytosol | 40.83 | 35.48 |
| CDX96739 | Canola | cytosol | 41.12 | 35.37 |
| CDX81858 | Canola | cytosol | 40.53 | 35.22 |
| CDX83876 | Canola | cytosol | 40.83 | 34.94 |
| CDX87784 | Canola | cytosol | 26.33 | 33.46 |
| CDY60036 | Canola | cytosol | 41.72 | 30.13 |
| CDX81189 | Canola | cytosol, nucleus, plastid | 36.98 | 28.74 |
| CDX76497 | Canola | cytosol | 34.32 | 25.16 |
| CDY09272 | Canola | cytosol | 34.02 | 24.95 |
| CDY38979 | Canola | cytosol | 31.95 | 24.66 |
| CDY01580 | Canola | cytosol | 33.14 | 24.3 |
| CDY37922 | Canola | nucleus | 37.87 | 24.15 |
| CDY56886 | Canola | nucleus | 34.91 | 23.05 |
| CDY49306 | Canola | cytosol | 32.54 | 23.01 |
| CDY13047 | Canola | cytosol | 31.66 | 23.01 |
| CDY39427 | Canola | cytosol | 31.95 | 22.5 |
| CDY01821 | Canola | nucleus | 41.72 | 20.23 |
| CDX96081 | Canola | nucleus | 42.01 | 20.03 |
| CDY23116 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 31.36 | 18.83 |
| CDY26373 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX87783 | Canola | extracellular, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.1 | MapMan:18.4.3.1.1 | Gene3D:3.30.200.20 | GO:A0A078JLD5 | UniProt:A0A078JLD5 |
| EnsemblPlants:CDY66197 | ProteinID:CDY66197 | ProteinID:CDY66197.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00052280001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF323 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE5F2F | : |
Description
BnaCnng49920DBnaCnng49920D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JLD5]
Coordinates
chrLK035137:-:16219..19119
Molecular Weight (calculated)
38784.0 Da
IEP (calculated)
6.707
GRAVY (calculated)
-0.239
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: CTVTTRLSLS LYKLPFHPES EDPSVSLHPI VAGDVFQPSL ILEVMDQYEK VEKIGEGTYG VVYKARDKVT NETIALKKIR LEQEDEGVPS TAIREISLLK
101: EMQHSNIVKL QDVVHSEKRL YLVFEYLDLD LKKHMDSSPD FSKDLHMIKR YVYQILRGIA YCHSHRVLHR DLKPQNLLID RRTNSLKLAD FGLARAFGIP
201: VRTFTHEVVT LWYRAPEILL GSHHYSTPVD IWSVGCIFAE MISQKPLFPG DSEIDQLFKI FRIMGTPTED TWPGVTSLPD YKSAFPKWKP TDLESFVPNL
301: DPNGIDLLSK MLLMDPTKRI NARAALEHDY FKDIGVMP
101: EMQHSNIVKL QDVVHSEKRL YLVFEYLDLD LKKHMDSSPD FSKDLHMIKR YVYQILRGIA YCHSHRVLHR DLKPQNLLID RRTNSLKLAD FGLARAFGIP
201: VRTFTHEVVT LWYRAPEILL GSHHYSTPVD IWSVGCIFAE MISQKPLFPG DSEIDQLFKI FRIMGTPTED TWPGVTSLPD YKSAFPKWKP TDLESFVPNL
301: DPNGIDLLSK MLLMDPTKRI NARAALEHDY FKDIGVMP
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.