Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32487 | Canola | cytosol | 43.78 | 82.68 |
| CDY37453 | Canola | cytosol | 43.67 | 82.47 |
| AT1G02970.1 | Thale cress | cytosol, mitochondrion | 43.67 | 80.0 |
| CDY01309 | Canola | nucleus | 22.93 | 75.54 |
| GSMUA_Achr1P12120_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 19.76 | 63.73 |
| PGSC0003DMT400029618 | Potato | cytosol | 24.89 | 62.98 |
| VIT_07s0104g01740.t01 | Wine grape | cytosol | 29.59 | 59.96 |
| KRH17892 | Soybean | cytosol | 25.87 | 53.99 |
| KRH68152 | Soybean | mitochondrion | 29.69 | 53.86 |
| Solyc09g074830.2.1 | Tomato | plastid | 28.6 | 51.37 |
| HORVU6Hr1G018060.2 | Barley | cytosol | 23.25 | 44.47 |
| Os02t0135300-00 | Rice | cytosol | 24.89 | 43.85 |
| TraesCS6A01G099900.1 | Wheat | mitochondrion | 24.02 | 42.47 |
| TraesCS6B01G128100.1 | Wheat | mitochondrion | 23.69 | 42.22 |
| TraesCS6D01G082400.1 | Wheat | mitochondrion | 23.58 | 41.94 |
| Zm00001d053998_P001 | Maize | mitochondrion | 24.45 | 41.64 |
| KXG29416 | Sorghum | mitochondrion | 24.45 | 41.64 |
| GSMUA_Achr1P12130_001 | Banana | mitochondrion | 6.44 | 23.69 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.2.5 | MapMan:18.4.21 | Gene3D:3.30.200.20 | Gene3D:3.30.40.10 | GO:A0A078DCC5 |
| EnsemblPlants:CDX86692 | ProteinID:CDX86692 | ProteinID:CDX86692.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00145378001 |
| InterPro:IPR000719 | InterPro:IPR013083 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| ScanProsite:PS01359 | PFscan:PS50011 | PANTHER:PTHR11042 | PANTHER:PTHR11042:SF128 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SUPFAM:SSF56112 | SUPFAM:SSF57903 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EF04BC | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
BnaC08g00110D
Coordinates
chrLK031846:-:1697207..1702435
Molecular Weight (calculated)
103798.0 Da
IEP (calculated)
5.471
GRAVY (calculated)
-0.555
Length
916 amino acids
Sequence
(BLAST)
(BLAST)
001: MVERKKGRTL LGKRKALGTI ETRRTKKSRK MEGTLERHSL LQFGQLSKLS FDNLTPSSAA DSSELRNELG SVGADGDWGE KEFILSQDFF CTPDYITPDN
101: QNLMSDLNIS MDHSPCPRSP VKLTSVKSKR CRQDSFTFTT SDSTWASKYK VDEQENDDID TDEIVVDKTE RTGYVSRSAV ALRSRVMPPP CLKNPYVMNE
201: SETATDPFRY QRSKCASFLP ASMSGDGLSR YLTDFHEIQQ IGAGNFSRVF KVLKRIDGCL YAVKHSTRKL YLDSERRKAM MEVQALAALG FHENVVGYYN
301: SWYENEQLYI QLELCDHSLS KKSSLKISER EILVIMHQMA KALQFVHEKG IAHLDVKPDN IYIKNGVCKL GDFGCATRLD KSLPVEEGDA RYMPQEVLNE
401: NYEHLDKVDI FSLGVTVYEL IRGSPLTESR NKSLNIKEGK LPLLPGHSLQ LQQLLKTMMD RDPSRRPSAT ELVEHPMFDR IRVQMENHSD AEGSEMFGDW
501: DFLRVSENDR GGGSTSTATA GGGRVLPPWA DPSYEWGGGK WKVDGRKKKK ESDLSLEDLM KEYSSLPPQM AEWYWCIEYV AKYVKDLRCI LDLMNLGYPT
601: TNDYGSRINE ILSLRILESL FDPTKNAAAA TVVVGPRIEF DLSLSTTHVL NAILEHVTVS ELRPGMPELS KFNLLPFFAH KNMSLPPCAL EVLRDVSAME
701: DQTNAAPTME ANDAVFRDDR SEHRRDVCEE MAIDEEQLHT GLEQTNMKDK DEVVVIDHED SPPVQRDEVI VIDGNDTTAE QFINEGDTAR ETSSPSLDVR
801: VKCTKDGAWL INESDEESDT VRDPPSSRPE NVCWKCERVG GASLLICSRS ECAAKVHKEC LNAPAHFDED DNFHCPVCWY DRVTTEYIES RKLMSCAKRR
901: LVKFLPLLSR ASKRLR
101: QNLMSDLNIS MDHSPCPRSP VKLTSVKSKR CRQDSFTFTT SDSTWASKYK VDEQENDDID TDEIVVDKTE RTGYVSRSAV ALRSRVMPPP CLKNPYVMNE
201: SETATDPFRY QRSKCASFLP ASMSGDGLSR YLTDFHEIQQ IGAGNFSRVF KVLKRIDGCL YAVKHSTRKL YLDSERRKAM MEVQALAALG FHENVVGYYN
301: SWYENEQLYI QLELCDHSLS KKSSLKISER EILVIMHQMA KALQFVHEKG IAHLDVKPDN IYIKNGVCKL GDFGCATRLD KSLPVEEGDA RYMPQEVLNE
401: NYEHLDKVDI FSLGVTVYEL IRGSPLTESR NKSLNIKEGK LPLLPGHSLQ LQQLLKTMMD RDPSRRPSAT ELVEHPMFDR IRVQMENHSD AEGSEMFGDW
501: DFLRVSENDR GGGSTSTATA GGGRVLPPWA DPSYEWGGGK WKVDGRKKKK ESDLSLEDLM KEYSSLPPQM AEWYWCIEYV AKYVKDLRCI LDLMNLGYPT
601: TNDYGSRINE ILSLRILESL FDPTKNAAAA TVVVGPRIEF DLSLSTTHVL NAILEHVTVS ELRPGMPELS KFNLLPFFAH KNMSLPPCAL EVLRDVSAME
701: DQTNAAPTME ANDAVFRDDR SEHRRDVCEE MAIDEEQLHT GLEQTNMKDK DEVVVIDHED SPPVQRDEVI VIDGNDTTAE QFINEGDTAR ETSSPSLDVR
801: VKCTKDGAWL INESDEESDT VRDPPSSRPE NVCWKCERVG GASLLICSRS ECAAKVHKEC LNAPAHFDED DNFHCPVCWY DRVTTEYIES RKLMSCAKRR
901: LVKFLPLLSR ASKRLR
001: MFEKNGRTLL AKRKTQGTIK TRASKKIRKM EGTLERHSLL QFGQLSKISF ENRPSSNVAS SAFQGLLDSD SSELRNQLGS ADSDANCGEK DFILSQDFFC
101: TPDYITPDNQ NLMSGLDISK DHSPCPRSPV KLNTVKSKRC RQESFTGNHS NSTWSSKHRV DEQENDDIDT DEVMGDKLQA NQTERTGYVS QAAVALRCRA
201: MPPPCLKNPY VLNQSETATD PFGHQRSKCA SFLPVSTSGD GLSRYLTDFH EIRQIGAGHF SRVFKVLKRM DGCLYAVKHS TRKLYLDSER RKAMMEVQAL
301: AALGFHENIV GYYSSWFENE QLYIQLELCD HSLSALPKKS SLKVSEREIL VIMHQIAKAL HFVHEKGIAH LDVKPDNIYI KNGVCKLGDF GCATRLDKSL
401: PVEEGDARYM PQEILNEDYE HLDKVDIFSL GVTVYELIKG SPLTESRNQS LNIKEGKLPL LPGHSLQLQQ LLKTMMDRDP KRRPSARELL DHPMFDRIRG
101: TPDYITPDNQ NLMSGLDISK DHSPCPRSPV KLNTVKSKRC RQESFTGNHS NSTWSSKHRV DEQENDDIDT DEVMGDKLQA NQTERTGYVS QAAVALRCRA
201: MPPPCLKNPY VLNQSETATD PFGHQRSKCA SFLPVSTSGD GLSRYLTDFH EIRQIGAGHF SRVFKVLKRM DGCLYAVKHS TRKLYLDSER RKAMMEVQAL
301: AALGFHENIV GYYSSWFENE QLYIQLELCD HSLSALPKKS SLKVSEREIL VIMHQIAKAL HFVHEKGIAH LDVKPDNIYI KNGVCKLGDF GCATRLDKSL
401: PVEEGDARYM PQEILNEDYE HLDKVDIFSL GVTVYELIKG SPLTESRNQS LNIKEGKLPL LPGHSLQLQQ LLKTMMDRDP KRRPSARELL DHPMFDRIRG
Arabidopsis Description
WEE1Wee1-like protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q8L4H0]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.