Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03525 | Canola | mitochondrion | 93.23 | 93.23 |
| CDY40525 | Canola | mitochondrion | 93.23 | 93.23 |
| CDY09265 | Canola | cytosol | 75.94 | 90.18 |
| CDX72137 | Canola | endoplasmic reticulum | 87.97 | 55.71 |
| CDY27214 | Canola | plastid | 87.97 | 43.66 |
| CDX79970 | Canola | mitochondrion, plastid | 96.99 | 35.73 |
| CDY23881 | Canola | plastid | 96.24 | 35.36 |
| GSMUA_Achr8P21420_001 | Banana | endoplasmic reticulum, golgi | 64.66 | 32.58 |
| AT2G40800.1 | Thale cress | mitochondrion | 91.73 | 32.36 |
| KRH53699 | Soybean | mitochondrion | 80.45 | 31.56 |
| KRH64227 | Soybean | mitochondrion | 78.95 | 31.16 |
| VIT_13s0067g00210.t01 | Wine grape | mitochondrion, plastid | 83.46 | 29.06 |
| Solyc03g095470.2.1 | Tomato | plastid | 78.95 | 28.61 |
| PGSC0003DMT400013467 | Potato | plastid | 78.95 | 28.38 |
| Os01t0168300-01 | Rice | mitochondrion | 69.92 | 24.47 |
| Zm00001d008689_P003 | Maize | mitochondrion | 68.42 | 24.07 |
| EES00240 | Sorghum | mitochondrion | 69.17 | 23.9 |
| Zm00001d039709_P001 | Maize | mitochondrion | 68.42 | 23.82 |
| TraesCS3B01G111500.1 | Wheat | mitochondrion, plastid | 67.67 | 23.5 |
| TraesCS3A01G095800.1 | Wheat | mitochondrion | 67.67 | 23.44 |
| TraesCS3D01G096200.1 | Wheat | mitochondrion | 67.67 | 23.44 |
| HORVU3Hr1G017300.2 | Barley | mitochondrion, plastid | 67.67 | 21.69 |
| GSMUA_Achr10P... | Banana | mitochondrion | 23.31 | 10.1 |
| CDY20610 | Canola | plasma membrane | 2.26 | 2.48 |
Protein Annotations
| EnsemblPlants:CDY36983 | EnsemblPlantsGene:GSBRNA2T00063144001 | ncoils:Coil | PANTHER:PTHR36354 | ProteinID:CDY36983 | ProteinID:CDY36983.1 |
| SEG:seg | UniParc:UPI0004EEADC0 | UniProt:A0A078HJH0 | MapMan:35.2 | : | : |
Description
BnaC09g17990DBnaC09g17990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJH0]
Coordinates
chrLK032388:-:262254..262788
Molecular Weight (calculated)
15180.3 Da
IEP (calculated)
6.042
GRAVY (calculated)
-0.684
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGCGITFKK FKPTIRSKRC FLLFPVQGSE RKGLVSVEVK KKKGQYDMKL LAVDIPMASG PDQRLYLIGD EEGYKVSGGL ISELRDPVVK VMAATKEFNN
101: LDRIEEEEDA ERELQEAERK HREEIEKLEK ESS
101: LDRIEEEEDA ERELQEAERK HREEIEKLEK ESS
001: MVKPSDFKAI QGFIRLHYTR VNPVTIGRSN PSALSSPAIP SNGVSQLQPK FSFHSLSSKP TSKNVGLYQI LSSPKLNPKL QQALGLPRVN VSFASAFRLV
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS
Arabidopsis Description
Import inner membrane translocase subunit [Source:UniProtKB/TrEMBL;Acc:Q9SHB0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.