Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
plasma membrane: 27341663 mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039709_P001 | Maize | mitochondrion | 89.95 | 89.01 |
| EES00240 | Sorghum | mitochondrion | 88.62 | 87.01 |
| Os01t0168300-01 | Rice | mitochondrion | 78.31 | 77.89 |
| CDX72137 | Canola | endoplasmic reticulum | 43.12 | 77.62 |
| TraesCS3B01G111500.1 | Wheat | mitochondrion, plastid | 77.78 | 76.76 |
| TraesCS3D01G096200.1 | Wheat | mitochondrion | 77.51 | 76.3 |
| TraesCS3A01G095800.1 | Wheat | mitochondrion | 75.13 | 73.96 |
| CDY27214 | Canola | plastid | 49.74 | 70.15 |
| HORVU3Hr1G017300.2 | Barley | mitochondrion, plastid | 76.98 | 70.12 |
| CDY09265 | Canola | cytosol | 20.63 | 69.64 |
| CDY03525 | Canola | mitochondrion | 24.07 | 68.42 |
| CDY36983 | Canola | mitochondrion | 24.07 | 68.42 |
| CDY40525 | Canola | mitochondrion | 23.81 | 67.67 |
| GSMUA_Achr8P21420_001 | Banana | endoplasmic reticulum, golgi | 46.3 | 66.29 |
| KRH53699 | Soybean | mitochondrion | 51.85 | 57.82 |
| KRH64227 | Soybean | mitochondrion | 50.79 | 56.97 |
| Bra007246.1-P | Field mustard | mitochondrion | 53.44 | 54.74 |
| PGSC0003DMT400013467 | Potato | plastid | 52.91 | 54.05 |
| VIT_13s0067g00210.t01 | Wine grape | mitochondrion, plastid | 54.5 | 53.93 |
| Solyc03g095470.2.1 | Tomato | plastid | 52.12 | 53.68 |
| Bra004587.1-P | Field mustard | mitochondrion, plastid | 50.53 | 52.91 |
| CDX79970 | Canola | mitochondrion, plastid | 50.53 | 52.91 |
| CDY23881 | Canola | plastid | 50.26 | 52.49 |
| GSMUA_Achr10P... | Banana | mitochondrion | 41.27 | 50.81 |
| AT2G40800.1 | Thale cress | mitochondrion | 50.0 | 50.13 |
| CDY20610 | Canola | plasma membrane | 14.81 | 46.28 |
| AT3G56430.1 | Thale cress | mitochondrion | 51.59 | 44.93 |
| Bra016969.1-P | Field mustard | mitochondrion | 15.34 | 29.59 |
Protein Annotations
| EnsemblPlants:Zm00001d008689_P003 | EnsemblPlants:Zm00001d008689_T003 | EnsemblPlantsGene:Zm00001d008689 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR36354 | ProteinID:AQK90435.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000220B2E3 |
| UniProt:K7UYS3 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:17230653..17233736
Molecular Weight (calculated)
41731.5 Da
IEP (calculated)
10.422
GRAVY (calculated)
-0.286
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAALSSRRA LHSLHRRLLF HPSPSPAAAR RALPTSTRSP IPAHSPTFSF SFYSSSRFFT TARPDARLRH GMLPQRLIGG VRSVANGGSK LGPLGQGVKG
101: LGRPMEAARS AAARYRAAVG LQVEAFWRRN SMILVGAGGV IVCFLLWRIM FGIASTFVGL SEGMAKYGFL ALATAIVAFA GMYARARLTI NPDKVYRLAM
201: TKLNTSAAIL EVMGAPLTGT DVRAYVMSGG GPKLKDFKFK LGSKRCFLIF PIKGSERRGL VSVEAKKKNG QYDMKLLAVD IPMASGPDQR LFLVGDEQEY
301: KVGGGLISEL RDPIVKAMAA EKEFDYLDER EDEEDERRER EEAEQEEAEA LRREEERLRQ AGEERRRREE AESLEKAT
101: LGRPMEAARS AAARYRAAVG LQVEAFWRRN SMILVGAGGV IVCFLLWRIM FGIASTFVGL SEGMAKYGFL ALATAIVAFA GMYARARLTI NPDKVYRLAM
201: TKLNTSAAIL EVMGAPLTGT DVRAYVMSGG GPKLKDFKFK LGSKRCFLIF PIKGSERRGL VSVEAKKKNG QYDMKLLAVD IPMASGPDQR LFLVGDEQEY
301: KVGGGLISEL RDPIVKAMAA EKEFDYLDER EDEEDERRER EEAEQEEAEA LRREEERLRQ AGEERRRREE AESLEKAT
001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK
Arabidopsis Description
At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.