Factsheet for HORVU3Hr1G017300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G096200.1	Wheat	mitochondrion	84.34	91.15
TraesCS3B01G111500.1	Wheat	mitochondrion, plastid	84.1	91.12
TraesCS3A01G095800.1	Wheat	mitochondrion	80.0	86.46
Os01t0168300-01	Rice	mitochondrion	74.7	81.58
EES00240	Sorghum	mitochondrion	73.25	78.96
Zm00001d039709_P001	Maize	mitochondrion	71.81	78.01
Zm00001d008689_P003	Maize	mitochondrion	70.12	76.98
CDX72137	Canola	endoplasmic reticulum	38.8	76.67
CDY09265	Canola	cytosol	18.8	69.64
CDY27214	Canola	plastid	44.58	69.03
CDY03525	Canola	mitochondrion	21.69	67.67
CDY36983	Canola	mitochondrion	21.69	67.67
CDY40525	Canola	mitochondrion	21.45	66.92
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	40.96	64.39
KRH64227	Soybean	mitochondrion	46.02	56.68
KRH53699	Soybean	mitochondrion	46.27	56.64
Solyc03g095470.2.1	Tomato	plastid	47.47	53.68
Bra007246.1-P	Field mustard	mitochondrion	47.71	53.66
PGSC0003DMT400013467	Potato	plastid	47.71	53.51
CDX79970	Canola	mitochondrion, plastid	46.02	52.91
Bra004587.1-P	Field mustard	mitochondrion, plastid	46.02	52.91
CDY23881	Canola	plastid	46.02	52.76
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	47.95	52.09
GSMUA_Achr10P...	Banana	mitochondrion	36.87	49.84
AT2G40800.1	Thale cress	mitochondrion	44.82	49.34
AT3G56430.1	Thale cress	mitochondrion	47.71	45.62
CDY20610	Canola	plasma membrane	12.77	43.8
Bra016969.1-P	Field mustard	mitochondrion	14.46	30.61

Protein Annotations

EnsemblPlants:HORVU3Hr1G017300.2	EnsemblPlantsGene:HORVU3Hr1G017300	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	ncoils:Coil
PANTHER:PTHR36354	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B469B44	UniProt:A0A287K9J4	MapMan:35.2

Description

No Description!

Coordinates

chrchr3H:+:43838102..43841892

Molecular Weight (calculated)

45481.5 Da

IEP (calculated)

10.723

GRAVY (calculated)

-0.294

Length

415 amino acids

Sequence
(BLAST)

001: RVQPDHPFPV SSLRLLRPPP SPLPRGANPI SIPMAAAALT SSRRALHTLH RHLLLRPSPA TALRAPPTPV PRHFPAPPPS SSRFFTTGAS LPRHGLLAPP
101: RLPQHHKAMR RLVGGVRPFA SRGGGGSKLA PLGQGVKGLG RPVEAARGAA ARYREAVGLQ VEAFWRRNYL LLVGAGGVII CIALWRVMFG IASTFVGLSE
201: GMAKYGFLAL ATAMVAFAGM YARARFTINP DKVYRTAMTK LNTSAAILEV MGAPLAGTDV RAYVMSGGGP KLKDFKFRVG GKRCFLIFPI KGSERKGLVS
301: VEVKKKKGQY DMKLLAVDIP MATGPDQRLF LVGDEQEYKV GGGLISELRD PIVKAMAAEK EFDYLDERED AEDERREREE AEEEAAEALR REEERLREEA
401: KERQRREAEN LEKAS

Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)

001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK

Arabidopsis Description

At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.