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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX72137 Canola endoplasmic reticulum 44.01 90.95
CDY27214 Canola plastid 52.07 84.33
Bra007246.1-P Field mustard mitochondrion 66.82 78.59
AT2G40800.1 Thale cress mitochondrion 64.29 74.01
KRH64227 Soybean mitochondrion 48.39 62.31
KRH53699 Soybean mitochondrion 48.62 62.24
GSMUA_Achr8P21420_001 Banana endoplasmic reticulum, golgi 37.33 61.36
VIT_13s0067g00210.t01 Wine grape mitochondrion, plastid 49.08 55.76
PGSC0003DMT400013467 Potato plastid 47.0 55.14
Solyc03g095470.2.1 Tomato plastid 46.31 54.77
Os01t0168300-01 Rice mitochondrion 46.77 53.42
TraesCS3B01G111500.1 Wheat mitochondrion, plastid 47.0 53.26
TraesCS3D01G096200.1 Wheat mitochondrion 46.31 52.34
TraesCS3A01G095800.1 Wheat mitochondrion 45.85 51.82
Zm00001d008689_P003 Maize mitochondrion 44.93 51.59
EES00240 Sorghum mitochondrion 45.62 51.43
Zm00001d039709_P001 Maize mitochondrion 45.16 51.31
HORVU3Hr1G017300.2 Barley mitochondrion, plastid 45.62 47.71
CDY20610 Canola plasma membrane 12.67 45.45
GSMUA_Achr10P... Banana mitochondrion 31.8 44.95
Protein Annotations
MapMan:35.2EntrezGene:824810ProteinID:AEE79521.1ArrayExpress:AT3G56430EnsemblPlantsGene:AT3G56430RefSeq:AT3G56430
TAIR:AT3G56430RefSeq:AT3G56430-TAIR-GEnsemblPlants:AT3G56430.1TAIR:AT3G56430.1EMBL:BT022014EMBL:BT028968
ProteinID:CAB88046.1ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005773GO:GO:0008150GO:GO:0009536GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0019725GO:GO:0045454RefSeq:NP_191202.1PO:PO:0000013PO:PO:0000037
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0005052PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281UniProt:Q9LXZ7TMHMM:TMhelix
UniParc:UPI00000A7840SEG:seg::::
Description
At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
Coordinates
chr3:-:20923334..20925912
Molecular Weight (calculated)
48536.9 Da
IEP (calculated)
10.266
GRAVY (calculated)
-0.226
Length
434 amino acids
Sequence
(BLAST)
001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.