CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039709_P001	Maize	mitochondrion	89.09	89.79
Zm00001d008689_P003	Maize	mitochondrion	87.01	88.62
Os01t0168300-01	Rice	mitochondrion	80.78	81.84
TraesCS3B01G111500.1	Wheat	mitochondrion, plastid	79.74	80.16
TraesCS3D01G096200.1	Wheat	mitochondrion	79.74	79.95
CDX72137	Canola	endoplasmic reticulum	42.34	77.62
TraesCS3A01G095800.1	Wheat	mitochondrion	76.36	76.56
HORVU3Hr1G017300.2	Barley	mitochondrion, plastid	78.96	73.25
CDY09265	Canola	cytosol	20.52	70.54
CDY27214	Canola	plastid	48.31	69.4
CDY03525	Canola	mitochondrion	23.9	69.17
CDY36983	Canola	mitochondrion	23.9	69.17
CDY40525	Canola	mitochondrion	23.64	68.42
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	45.71	66.67
KRH53699	Soybean	mitochondrion	50.65	57.52
KRH64227	Soybean	mitochondrion	49.35	56.38
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	54.29	54.71
Solyc03g095470.2.1	Tomato	plastid	51.69	54.22
PGSC0003DMT400013467	Potato	plastid	51.95	54.05
Bra007246.1-P	Field mustard	mitochondrion	51.69	53.93
CDY23881	Canola	plastid	50.65	53.87
CDX79970	Canola	mitochondrion, plastid	50.39	53.74
Bra004587.1-P	Field mustard	mitochondrion, plastid	50.39	53.74
GSMUA_Achr10P...	Banana	mitochondrion	41.3	51.79
AT2G40800.1	Thale cress	mitochondrion	50.39	51.46
CDY20610	Canola	plasma membrane	14.55	46.28
AT3G56430.1	Thale cress	mitochondrion	51.43	45.62
Bra016969.1-P	Field mustard	mitochondrion	15.58	30.61

Protein Annotations

EnsemblPlants:EES00240	EnsemblPlantsGene:SORBI_3003G054100	EntrezGene:8056560	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR36354	ProteinID:EES00240	ProteinID:EES00240.1	RefSeq:XP_002455120.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.5439	UniParc:UPI0001A84604	UniProt:C5XNH7	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr3:+:4893536..4897085

Molecular Weight (calculated)

42269.2 Da

IEP (calculated)

10.468

GRAVY (calculated)

-0.299

Length

385 amino acids

Sequence
(BLAST)

001: MAAALSSSRR ALHTLHRRLL LHPSPSPAAA RRALPTLTPT RTPIPAHSPT PTFSFSSSSR FSTTARPDAR LRHGVLPQGP QQRLVGGVRS VASGGSKLAP
101: LGQGVKGLGR PVEAARSAAA RYRAAVGLQV EAFWRRNYMV LVGAGAVIVC VALWRIMFGI ASTFVGLSEG MAKYGFLALA TAIVAFAGMY ARSRLTINPD
201: KVYRLAMTKL NTSAAILEVM GAPLTGTDVR AYVMSGGGPK LKDFKFKLGS KRCFLIFPIK GSERRGLVSV EVKKKKGQYD MKLLAVDIPM ASGPDQRLFL
301: VGDEQEYKVG GGLISELRDP IVKAMAAEKE FDYLDEREDE EDEQREREEA EQEAAEALRR EEERLRQEGE ERRRREEAER LEKAT

Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)

001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK

Arabidopsis Description

At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.