CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72137	Canola	endoplasmic reticulum	77.24	98.57
CDY40525	Canola	mitochondrion	43.66	87.97
CDY36983	Canola	mitochondrion	43.66	87.97
CDY03525	Canola	mitochondrion	43.28	87.22
CDY09265	Canola	cytosol	35.07	83.93
Bra007246.1-P	Field mustard	mitochondrion	93.66	68.02
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	62.31	63.26
CDX79970	Canola	mitochondrion, plastid	84.33	62.6
CDY23881	Canola	plastid	83.96	62.15
KRH53699	Soybean	mitochondrion	71.64	56.64
KRH64227	Soybean	mitochondrion	70.9	56.38
PGSC0003DMT400013467	Potato	plastid	74.63	54.05
Solyc03g095470.2.1	Tomato	plastid	73.88	53.95
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	74.25	52.09
AT3G56430.1	Thale cress	mitochondrion	84.33	52.07
Zm00001d008689_P003	Maize	mitochondrion	70.15	49.74
Os01t0168300-01	Rice	mitochondrion	70.15	49.47
TraesCS3B01G111500.1	Wheat	mitochondrion, plastid	69.78	48.83
TraesCS3D01G096200.1	Wheat	mitochondrion	69.78	48.7
EES00240	Sorghum	mitochondrion	69.4	48.31
TraesCS3A01G095800.1	Wheat	mitochondrion	69.03	48.18
Zm00001d039709_P001	Maize	mitochondrion	68.66	48.17
HORVU3Hr1G017300.2	Barley	mitochondrion, plastid	69.03	44.58
CDY20610	Canola	plasma membrane	19.4	42.98
GSMUA_Achr10P...	Banana	mitochondrion	46.64	40.72

Protein Annotations

EnsemblPlants:CDY27214	EnsemblPlantsGene:GSBRNA2T00037086001	GO:A0A078GPQ7	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR36354	ProteinID:CDY27214	ProteinID:CDY27214.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EECF8E	UniProt:A0A078GPQ7	MapMan:35.2	:	:	:

Description

BnaA09g35880DBnaA09g35880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPQ7]

Coordinates

chrLK032201:+:186788..188211

Molecular Weight (calculated)

29683.2 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.006

Length

268 amino acids

Sequence
(BLAST)

001: MGLLSFDLNP VSTPFPVSSS VGRYRVALGL HVDAFWKKNS LVVFGAGGVF VCIFLWRVMF GIASTFVGLS EGMAKYGFLA LSSAIVAFAG LYLRARFTIN
101: PDKVYRIAMR MLNTAANILE VMGAPLTGSD LRAYVMSGGG ITLKKFTPTI RSKRCFLLFP VQGAERKGLV SVEVKKKKGQ YDMKLLAVDI PMASGPDQRL
201: FLIGDEEEYR VGGGLISELR DPVVKAMAAA KEFDNLDRIE DEEDEERELQ EAERKQREET EKLEKDSS

Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)

001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK

Arabidopsis Description

At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.