Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40525 | Canola | mitochondrion | 92.86 | 78.2 |
| CDY36983 | Canola | mitochondrion | 90.18 | 75.94 |
| CDY03525 | Canola | mitochondrion | 89.29 | 75.19 |
| CDX72137 | Canola | endoplasmic reticulum | 83.04 | 44.29 |
| CDY27214 | Canola | plastid | 83.93 | 35.07 |
| CDX79970 | Canola | mitochondrion, plastid | 92.86 | 28.81 |
| CDY23881 | Canola | plastid | 91.96 | 28.45 |
| GSMUA_Achr8P21420_001 | Banana | endoplasmic reticulum, golgi | 65.18 | 27.65 |
| KRH53699 | Soybean | mitochondrion | 80.36 | 26.55 |
| KRH64227 | Soybean | mitochondrion | 79.46 | 26.41 |
| AT2G40800.1 | Thale cress | mitochondrion | 86.61 | 25.73 |
| VIT_13s0067g00210.t01 | Wine grape | mitochondrion, plastid | 82.14 | 24.08 |
| Solyc03g095470.2.1 | Tomato | plastid | 78.57 | 23.98 |
| PGSC0003DMT400013467 | Potato | plastid | 77.68 | 23.51 |
| Os01t0168300-01 | Rice | mitochondrion | 72.32 | 21.32 |
| Zm00001d008689_P003 | Maize | mitochondrion | 69.64 | 20.63 |
| EES00240 | Sorghum | mitochondrion | 70.54 | 20.52 |
| Zm00001d039709_P001 | Maize | mitochondrion | 69.64 | 20.42 |
| TraesCS3B01G111500.1 | Wheat | mitochondrion, plastid | 69.64 | 20.37 |
| TraesCS3A01G095800.1 | Wheat | mitochondrion | 69.64 | 20.31 |
| TraesCS3D01G096200.1 | Wheat | mitochondrion | 69.64 | 20.31 |
| HORVU3Hr1G017300.2 | Barley | mitochondrion, plastid | 69.64 | 18.8 |
| GSMUA_Achr10P... | Banana | mitochondrion | 15.18 | 5.54 |
| CDY20610 | Canola | plasma membrane | 2.68 | 2.48 |
Protein Annotations
| EnsemblPlants:CDY09265 | EnsemblPlantsGene:GSBRNA2T00001525001 | ncoils:Coil | PANTHER:PTHR36354 | ProteinID:CDY09265 | ProteinID:CDY09265.1 |
| SEG:seg | UniParc:UPI0004EC89DB | UniProt:A0A078F446 | MapMan:35.2 | : | : |
Description
BnaC03g62950DBnaC03g62950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F446]
Coordinates
chrLK031994:+:123826..124416
Molecular Weight (calculated)
12754.3 Da
IEP (calculated)
4.788
GRAVY (calculated)
-0.810
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVLPNSSER KGLVIVEVKK KKGQYDMKLL AVDIPMASGP DQRLYLIGDE EGYKVGGGLI SELRDPVVKA MAATKEFDNL DRIEEEEDAE RELQEAERKH
101: REEIEKLKKE SS
101: REEIEKLKKE SS
001: MVKPSDFKAI QGFIRLHYTR VNPVTIGRSN PSALSSPAIP SNGVSQLQPK FSFHSLSSKP TSKNVGLYQI LSSPKLNPKL QQALGLPRVN VSFASAFRLV
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS
Arabidopsis Description
Import inner membrane translocase subunit [Source:UniProtKB/TrEMBL;Acc:Q9SHB0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.