Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g095470.2.1 | Tomato | plastid | 94.86 | 95.64 |
| CDX72137 | Canola | endoplasmic reticulum | 47.03 | 82.86 |
| CDY36983 | Canola | mitochondrion | 28.38 | 78.95 |
| CDY09265 | Canola | cytosol | 23.51 | 77.68 |
| CDY03525 | Canola | mitochondrion | 27.84 | 77.44 |
| CDY40525 | Canola | mitochondrion | 27.84 | 77.44 |
| CDY27214 | Canola | plastid | 54.05 | 74.63 |
| GSMUA_Achr8P21420_001 | Banana | endoplasmic reticulum, golgi | 43.51 | 60.98 |
| KRH53699 | Soybean | mitochondrion | 55.41 | 60.47 |
| KRH64227 | Soybean | mitochondrion | 54.32 | 59.64 |
| Bra004587.1-P | Field mustard | mitochondrion, plastid | 57.84 | 59.28 |
| CDX79970 | Canola | mitochondrion, plastid | 57.84 | 59.28 |
| CDY23881 | Canola | plastid | 57.57 | 58.84 |
| Bra007246.1-P | Field mustard | mitochondrion | 57.57 | 57.72 |
| VIT_13s0067g00210.t01 | Wine grape | mitochondrion, plastid | 58.38 | 56.54 |
| AT2G40800.1 | Thale cress | mitochondrion | 57.3 | 56.23 |
| Os01t0168300-01 | Rice | mitochondrion | 56.22 | 54.74 |
| Zm00001d008689_P003 | Maize | mitochondrion | 54.05 | 52.91 |
| TraesCS3D01G096200.1 | Wheat | mitochondrion | 54.59 | 52.6 |
| TraesCS3B01G111500.1 | Wheat | mitochondrion, plastid | 54.05 | 52.22 |
| EES00240 | Sorghum | mitochondrion | 54.05 | 51.95 |
| TraesCS3A01G095800.1 | Wheat | mitochondrion | 52.97 | 51.04 |
| Zm00001d039709_P001 | Maize | mitochondrion | 51.89 | 50.26 |
| HORVU3Hr1G017300.2 | Barley | mitochondrion, plastid | 53.51 | 47.71 |
| AT3G56430.1 | Thale cress | mitochondrion | 55.14 | 47.0 |
| GSMUA_Achr10P... | Banana | mitochondrion | 37.03 | 44.63 |
| CDY20610 | Canola | plasma membrane | 12.7 | 38.84 |
| Bra016969.1-P | Field mustard | mitochondrion | 16.49 | 31.12 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400013467 | EnsemblPlantsGene:PGSC0003DMG400005253 | EntrezGene:102588510 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR36354 | PGSC:PGSC0003DMG400005253 | RefSeq:XP_006358158.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294C623 | UniProt:M1A2V9 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400005253]
Coordinates
chr3:-:36333889..36338155
Molecular Weight (calculated)
41498.3 Da
IEP (calculated)
10.173
GRAVY (calculated)
-0.266
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSSSSKFV LSNFYHYILS KPHQFSSPNV TSSGISHFLS NHSKIIEKPA VNQWVSNTQR THFSSSPFPR VLQNPSKKLD PDGSFLWNRK LLGFRYFSLK
101: SSGLGLGKNV LKNPVEAAKK TALRYKGAVG LQMEAFWKRN SMVLFGAAGI MVCILLWRIL FGIATTFIGL SEGMAKYGFL ALSSAIVAFA GLYLRSRFTI
201: NPDKVYRMAM RRLNTEAGIL EVMGAPLSGT DLRAYVMSGG GITLKNFKPR FRGKRCFLIF PIRGSERKGL VSVEVKNKQG QYDMKLLAVD IPMASGPDQR
301: LFLIGDEEEY RIGGGLIAEL RDPVVKAMAA TKEFEDRDDL EDEEDAEREL QEAERKHQEE IEKLEKGDSR
101: SSGLGLGKNV LKNPVEAAKK TALRYKGAVG LQMEAFWKRN SMVLFGAAGI MVCILLWRIL FGIATTFIGL SEGMAKYGFL ALSSAIVAFA GLYLRSRFTI
201: NPDKVYRMAM RRLNTEAGIL EVMGAPLSGT DLRAYVMSGG GITLKNFKPR FRGKRCFLIF PIRGSERKGL VSVEVKNKQG QYDMKLLAVD IPMASGPDQR
301: LFLIGDEEEY RIGGGLIAEL RDPVVKAMAA TKEFEDRDDL EDEEDAEREL QEAERKHQEE IEKLEKGDSR
001: MVKPSDFKAI QGFIRLHYTR VNPVTIGRSN PSALSSPAIP SNGVSQLQPK FSFHSLSSKP TSKNVGLYQI LSSPKLNPKL QQALGLPRVN VSFASAFRLV
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS
Arabidopsis Description
Import inner membrane translocase subunit [Source:UniProtKB/TrEMBL;Acc:Q9SHB0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.