Factsheet for GSMUA_Achr10P01720_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72137	Canola	endoplasmic reticulum	32.9	48.1
CDY27214	Canola	plastid	40.72	46.64
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	40.07	46.59
Os01t0168300-01	Rice	mitochondrion	52.77	42.63
CDY20610	Canola	plasma membrane	16.61	42.15
Zm00001d039709_P001	Maize	mitochondrion	52.44	42.15
KRH53699	Soybean	mitochondrion	45.93	41.59
EES00240	Sorghum	mitochondrion	51.79	41.3
Zm00001d008689_P003	Maize	mitochondrion	50.81	41.27
KRH64227	Soybean	mitochondrion	45.28	41.25
TraesCS3D01G096200.1	Wheat	mitochondrion	50.16	40.1
TraesCS3B01G111500.1	Wheat	mitochondrion, plastid	49.84	39.95
TraesCS3A01G095800.1	Wheat	mitochondrion	48.86	39.06
CDX79970	Canola	mitochondrion, plastid	44.95	38.23
Bra004587.1-P	Field mustard	mitochondrion, plastid	44.95	38.23
CDY23881	Canola	plastid	44.95	38.12
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	47.23	37.96
Bra007246.1-P	Field mustard	mitochondrion	45.28	37.67
Solyc03g095470.2.1	Tomato	plastid	44.63	37.33
PGSC0003DMT400013467	Potato	plastid	44.63	37.03
HORVU3Hr1G017300.2	Barley	mitochondrion, plastid	49.84	36.87
AT2G40800.1	Thale cress	mitochondrion	43.97	35.81
AT3G56430.1	Thale cress	mitochondrion	44.95	31.8
CDY36983	Canola	mitochondrion	10.1	23.31
CDY03525	Canola	mitochondrion	9.77	22.56
CDY40525	Canola	mitochondrion	9.12	21.05
CDY09265	Canola	cytosol	5.54	15.18
Bra016969.1-P	Field mustard	mitochondrion	8.14	12.76

Protein Annotations

EnsemblPlants:GSMUA_Achr10P01720_001	EnsemblPlants:GSMUA_Achr10T01720_001	EnsemblPlantsGene:GSMUA_Achr10G01720_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR36354	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002963F15	UniProt:M0REJ9	MapMan:35.2

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G01720_001]

Coordinates

chr10:+:3981128..3985366

Molecular Weight (calculated)

33938.5 Da

IEP (calculated)

11.482

GRAVY (calculated)

-0.045

Length

307 amino acids

Sequence
(BLAST)

001: MAKPYKGFIN GFRRLYSHEF PSNPSLRSPI SWGQTRFLNS APFRSSRSTS PSPLPDPASP NRFFNRFFTL DCNSRRLGSE TAIKLRSLGS GIKGLGRISE
101: SGYGSQIFSI RSLNFGKYGV FGGGVGKSVV DKPLSAVSSA FSRYREAVGL QMDAFWRRNY MILVGAGAVV ACFALWRIMF GIASTFVGLS EGMAKYGFLA
201: LASAIVAFAG MYFRARFTIN PDKVYRIAMR RLNTSAGILE VMGAPLTGTD VRAYVMSGGR PKLKNFKLKF GDKRCFLIFP IRGSERRGLV SVEVKNKKGQ
301: KFLLSTY

Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)

001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK

Arabidopsis Description

At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.