CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53699	Soybean	mitochondrion	92.28	91.74
CDX72137	Canola	endoplasmic reticulum	49.85	80.0
CDY09265	Canola	cytosol	26.41	79.46
CDY36983	Canola	mitochondrion	31.16	78.95
CDY03525	Canola	mitochondrion	30.86	78.2
CDY40525	Canola	mitochondrion	30.86	78.2
CDY27214	Canola	plastid	56.38	70.9
Bra004587.1-P	Field mustard	mitochondrion, plastid	63.5	59.28
CDX79970	Canola	mitochondrion, plastid	63.5	59.28
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	46.29	59.09
CDY23881	Canola	plastid	63.2	58.84
Bra007246.1-P	Field mustard	mitochondrion	63.2	57.72
AT2G40800.1	Thale cress	mitochondrion	63.8	57.03
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	64.09	56.54
Solyc03g095470.2.1	Tomato	plastid	59.64	54.77
PGSC0003DMT400013467	Potato	plastid	59.64	54.32
Zm00001d008689_P003	Maize	mitochondrion	56.97	50.79
Os01t0168300-01	Rice	mitochondrion	57.27	50.79
Zm00001d039709_P001	Maize	mitochondrion	56.68	50.0
TraesCS3B01G111500.1	Wheat	mitochondrion, plastid	56.68	49.87
EES00240	Sorghum	mitochondrion	56.38	49.35
TraesCS3D01G096200.1	Wheat	mitochondrion	56.08	49.22
TraesCS3A01G095800.1	Wheat	mitochondrion	55.79	48.96
AT3G56430.1	Thale cress	mitochondrion	62.31	48.39
HORVU3Hr1G017300.2	Barley	mitochondrion, plastid	56.68	46.02
GSMUA_Achr10P...	Banana	mitochondrion	41.25	45.28
CDY20610	Canola	plasma membrane	14.54	40.5
Bra016969.1-P	Field mustard	mitochondrion	17.8	30.61

Protein Annotations

EMBL:ACUP02002750	EnsemblPlants:KRH64227	EnsemblPlantsGene:GLYMA_04G223900	EntrezGene:100813613	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR36354	ProteinID:KRH64227	ProteinID:KRH64227.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002339C3E	UniProt:K7KLP3	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr4:-:49445400..49450262

Molecular Weight (calculated)

37426.2 Da

IEP (calculated)

10.277

GRAVY (calculated)

-0.188

Length

337 amino acids

Sequence
(BLAST)

001: MSRITQFRAL LLRGTTNQRS PLRRPAVADS SFASKPSFSN AAAFRASSPV FHPQQRLGNS TFRFFSSNFD KGFAQKVFDK PAAAVTSAFS RYREAIGLQI
101: EAFFKRNTLF LWGAGGVVLC AFLWRILFGI ANLFVGLSEG MAKYGFLALS SAIVAFTGLY IRARLTINPD KAYRMAMTKL NTSAGILEVM GAPLSGTDLR
201: AYVMSGGGLT VKKFKPSVRG RRCFLIFPIR GSEKKGLVSV EVKKKKGQYH MKLLAVDVPM ASGPDQRLYL IGNEEEYRVG GGIISELRDP VVRAMAATKE
301: FDDLDEIEEE EDAERERQEA ERKEHEEIEK LEKSSGT

Best Arabidopsis Sequence Match ( AT2G40800.1 )
(BLAST)

001: MVKPSDFKAI QGFIRLHYTR VNPVTIGRSN PSALSSPAIP SNGVSQLQPK FSFHSLSSKP TSKNVGLYQI LSSPKLNPKL QQALGLPRVN VSFASAFRLV
101: STKSSGFRKV DGSFARKVVD KPVKAVSSTF ARYREAIGLH IDAFWKKNSL VVFGAAGVFV CIFLWRIMFG IASTFVGLSE GMAKYGFLAL SSAIVAFSGL
201: YLRSRFTINP DKVYRMTMRK INTAAEILEV MGAPLSGSDL RAYVMSGGGI TFKKFKPTIR SKRCFLLFPV QGSEQKGLVS VEVKKKKGQY DMKLLAVDIP
301: MASGPDQRLF LIGDEEEYRI GGGLISVLRD PVVKAMAATK EFDNLDRIEE EEDAERELQE AERKHREEIE KLEKEGS

Arabidopsis Description

Import inner membrane translocase subunit [Source:UniProtKB/TrEMBL;Acc:Q9SHB0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.