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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • cytosol 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P21420_001 Banana endoplasmic reticulum, golgi 27.04 20.08
KRH53699 Soybean mitochondrion 31.63 18.29
Bra004587.1-P Field mustard mitochondrion, plastid 33.16 18.01
KRH64227 Soybean mitochondrion 30.61 17.8
Bra007246.1-P Field mustard mitochondrion 32.65 17.34
AT2G40800.1 Thale cress mitochondrion 32.65 16.98
PGSC0003DMT400013467 Potato plastid 31.12 16.49
Solyc03g095470.2.1 Tomato plastid 30.61 16.35
Os01t0168300-01 Rice mitochondrion 31.12 16.05
VIT_13s0067g00210.t01 Wine grape mitochondrion, plastid 30.61 15.71
TraesCS3B01G111500.1 Wheat mitochondrion, plastid 30.61 15.67
TraesCS3A01G095800.1 Wheat mitochondrion 30.61 15.62
TraesCS3D01G096200.1 Wheat mitochondrion 30.61 15.62
EES00240 Sorghum mitochondrion 30.61 15.58
Zm00001d008689_P003 Maize mitochondrion 29.59 15.34
Zm00001d039709_P001 Maize mitochondrion 29.59 15.18
HORVU3Hr1G017300.2 Barley mitochondrion, plastid 30.61 14.46
GSMUA_Achr10P... Banana mitochondrion 12.76 8.14
Protein Annotations
EnsemblPlants:Bra016969.1EnsemblPlants:Bra016969.1-PEnsemblPlantsGene:Bra016969PANTHER:PTHR36354UniParc:UPI0002545122UniProt:M4DKE0
MapMan:35.2:::::
Description
AT3G56430 (E=2e-017) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial import inner membrane translocase, subunit Tim21 (InterPro:IPR013261); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40800.1); Has 4137 Blast hits to 1696 proteins in 174 species: Archae - 12; Bacteria - 151; Metazoa - 1948; Fungi - 384; Plants - 114; Viruses - 61; Other Eukaryotes - 1467 (source: NCBI BLink).
Coordinates
chrA04:-:17349498..17351580
Molecular Weight (calculated)
22499.1 Da
IEP (calculated)
10.397
GRAVY (calculated)
-0.527
Length
196 amino acids
Sequence
(BLAST)
001: MIVANHRQPL PTAQAAFAGK PVAPVGAPLC SERKGLVSVE VKKKKGQYDM KLLAVDIPMV SGPDQRLLLI GDEERVQRIV DFDFTNGGME FWHDISNFRV
101: EETTFNSGGI HGKDVEVFFL LATQNHHEWS TPNVMAWRLQ KAKKESQTEN FAWIASNDLL REKRHLLTRI ESHKQDLTRP RTKWRKLANQ SVLRMR
Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)
001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK
Arabidopsis Description
At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.