Factsheet for Os01t0168300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G111500.1	Wheat	mitochondrion, plastid	82.63	81.98
TraesCS3D01G096200.1	Wheat	mitochondrion	82.63	81.77
EES00240	Sorghum	mitochondrion	81.84	80.78
TraesCS3A01G095800.1	Wheat	mitochondrion	80.79	79.95
Zm00001d039709_P001	Maize	mitochondrion	79.74	79.32
CDX72137	Canola	endoplasmic reticulum	43.42	78.57
Zm00001d008689_P003	Maize	mitochondrion	77.89	78.31
HORVU3Hr1G017300.2	Barley	mitochondrion, plastid	81.58	74.7
CDY09265	Canola	cytosol	21.32	72.32
CDY27214	Canola	plastid	49.47	70.15
CDY03525	Canola	mitochondrion	24.47	69.92
CDY36983	Canola	mitochondrion	24.47	69.92
CDY40525	Canola	mitochondrion	24.21	69.17
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	46.84	67.42
KRH53699	Soybean	mitochondrion	51.58	57.82
KRH64227	Soybean	mitochondrion	50.79	57.27
PGSC0003DMT400013467	Potato	plastid	54.74	56.22
Solyc03g095470.2.1	Tomato	plastid	53.95	55.86
Bra007246.1-P	Field mustard	mitochondrion	52.89	54.47
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	54.74	54.45
CDX79970	Canola	mitochondrion, plastid	51.32	54.02
Bra004587.1-P	Field mustard	mitochondrion, plastid	51.32	54.02
CDY23881	Canola	plastid	51.32	53.87
GSMUA_Achr10P...	Banana	mitochondrion	42.63	52.77
AT2G40800.1	Thale cress	mitochondrion	50.0	50.4
CDY20610	Canola	plasma membrane	15.0	47.11
AT3G56430.1	Thale cress	mitochondrion	53.42	46.77
Bra016969.1-P	Field mustard	mitochondrion	16.05	31.12

Protein Annotations

EMBL:AK063678	EnsemblPlants:Os01t0168300-01	EnsemblPlantsGene:Os01g0168300	EntrezGene:4325190	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	ProteinID:BAB39914.1	ProteinID:BAB92504.1	ProteinID:BAF04042.1	ProteinID:BAS70591.1
ProteinID:EEE53938.1	RefSeq:XP_015621570.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00000ABCF3	UniProt:Q9AS74
MapMan:35.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os01t0168300-01)

Coordinates

chr1:-:3493411..3496559

Molecular Weight (calculated)

41938.8 Da

IEP (calculated)

10.192

GRAVY (calculated)

-0.316

Length

380 amino acids

Sequence
(BLAST)

001: MAAALSSSRR ALHALHRRLL LHPLPSRHAP PIPRHHFPSP PSSSSSSSRF FTTTRPDARL LQLHARRLVV GGARSFAAGV GGGGSSKLAP LGQGVKGLGL
101: GRPLDAAKNA AARYREAVGL QVEAFWRRNY MLLVGAGAVV VCIALWRVMF GIASTFVGLS EGMAKYGFLA LATAMVAFAG MYTRSRFTIN PDKVYRIAMT
201: KLNTSAAILE VMGAPLAGTD VRAYVMSGGG PKLKDFKFRL GGKRCFLIFP IKGSERKGLV SVEVKKKKGQ YDMKLLAVDI PMASGPDQRL FLVGDEQEYK
301: VGGGLISELR DPIVKAMAAE KEFDYLDERE DAEDEARERE EAERRQQEEE AEALRREEER LREEYEERKR QEAENLEKTT

Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)

001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK

Arabidopsis Description

At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.