Factsheet for TraesCS3B01G111500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G096200.1	Wheat	mitochondrion	95.82	95.57
TraesCS3A01G095800.1	Wheat	mitochondrion	88.77	88.54
HORVU3Hr1G017300.2	Barley	mitochondrion, plastid	91.12	84.1
Os01t0168300-01	Rice	mitochondrion	81.98	82.63
EES00240	Sorghum	mitochondrion	80.16	79.74
Zm00001d039709_P001	Maize	mitochondrion	78.07	78.27
Zm00001d008689_P003	Maize	mitochondrion	76.76	77.78
CDX72137	Canola	endoplasmic reticulum	42.3	77.14
CDY27214	Canola	plastid	48.83	69.78
CDY09265	Canola	cytosol	20.37	69.64
CDY03525	Canola	mitochondrion	23.5	67.67
CDY36983	Canola	mitochondrion	23.5	67.67
CDY40525	Canola	mitochondrion	23.24	66.92
GSMUA_Achr8P21420_001	Banana	endoplasmic reticulum, golgi	44.39	64.39
KRH64227	Soybean	mitochondrion	49.87	56.68
KRH53699	Soybean	mitochondrion	49.87	56.34
Bra007246.1-P	Field mustard	mitochondrion	53.26	55.28
Solyc03g095470.2.1	Tomato	plastid	51.96	54.22
PGSC0003DMT400013467	Potato	plastid	52.22	54.05
CDX79970	Canola	mitochondrion, plastid	50.65	53.74
Bra004587.1-P	Field mustard	mitochondrion, plastid	50.65	53.74
CDY23881	Canola	plastid	50.65	53.59
VIT_13s0067g00210.t01	Wine grape	mitochondrion, plastid	53.0	53.14
AT2G40800.1	Thale cress	mitochondrion	49.09	49.87
GSMUA_Achr10P...	Banana	mitochondrion	39.95	49.84
AT3G56430.1	Thale cress	mitochondrion	53.26	47.0
CDY20610	Canola	plasma membrane	14.1	44.63
Bra016969.1-P	Field mustard	mitochondrion	15.67	30.61

Protein Annotations

EnsemblPlants:TraesCS3B01G111500.1	EnsemblPlantsGene:TraesCS3B01G111500	ncoils:Coil	PANTHER:PTHR36354	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:77688427..77691888

Molecular Weight (calculated)

41916.0 Da

IEP (calculated)

10.454

GRAVY (calculated)

-0.304

Length

383 amino acids

Sequence
(BLAST)

001: MAAAALTSSR RALHTLHRRL LLRPTPFPSA RAPPTPVPRH FPAPPAPSSS RFFTTARPEA RPPRPGLLAP PKQHKAMQRL VGGLRPFASG GGGGAKLAPL
101: GQGVKGLGRP VEAAKNAAAR YREAVGLQVE AFWRRNYLLL VGAGGVIVCI ALWRVMFGIA STFVGLSEGM AKYGFLALAT AMVAFAGMYA RARFTINPDK
201: VYRIAMTKLN TSAAILEVMG APLAGTDVRA YVMSGGGPKL KDFKFRVGGK RCFLIFPIKG SERKGLVSVE VKKKKGQYDM KLLAVDIPMA TGPDQRLFLV
301: GDEQEYKVGG GLISELRDPI VKAMAAEKEF DYLDEREDAE DERREQEEAE EEAAEALRRE EDRLREEAKE RQRREAENLE KGS

Best Arabidopsis Sequence Match ( AT3G56430.1 )
(BLAST)

001: MVKPSDFKAV HKLIQLHYSR VNLFTTTGWS KLSALSSPAL PSNGVSQLQP KSGFHTFSSR PTSKNFGLSQ ILPSNGVSQL QPKTSFHSFL SRPTSKNVGL
101: SQILPSPKLV PGLQNCGVAL VKPRVNMNFV SAFRLFSSSG FRKVDGNFAR KVVDKPIKAV SSTFARYRMA LGLHVDAFWK KNNLLVFGAG AVFVCIFLWR
201: VMFGIASTFV GLSEGMAKYG FLALSSAIVA FAGLYLRARF TINPDKVYRI TMRKLNTAAD VLEVMGAPLA GSDLRAYVMS GGGITFKKFK PTIRNKRCFL
301: LFPVQGSERK GLVSVEVKKK KGQYDMKLLA VDIPMASGPD QRLFLIGDEE EYRVGGGLIS ELRDPVVKAM AATKEFDNLD RIEEEEDAER ELQEAERKER
401: EEIELQEAER KEREEFELQE AERKQREEIE KLEK

Arabidopsis Description

At3g56430 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.