CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017105.1-P	Field mustard	plastid	99.03	99.03
CDX91486	Canola	cytosol	92.27	95.5
CDX74892	Canola	cytosol, plastid	93.24	94.61
AT2G38730.1	Thale cress	cytosol	90.82	94.47
CDX93307	Canola	plastid	93.24	94.15
KRH13330	Soybean	endoplasmic reticulum, nucleus	73.91	84.53
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	76.33	83.16
VIT_13s0084g00620.t01	Wine grape	cytosol	75.85	83.07
KRH37809	Soybean	nucleus	77.78	82.99
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	75.85	82.63
KRH20677	Soybean	cytosol	71.01	80.33
TraesCS5A01G467000.1	Wheat	golgi, unclear	76.33	79.8
TraesCS5B01G478800.1	Wheat	plastid	76.33	79.8
HORVU5Hr1G111410.1	Barley	plastid	75.85	79.29
TraesCS5D01G479900.1	Wheat	nucleus	75.85	79.29
EER90660	Sorghum	plastid	76.33	78.61
Os03t0811600-01	Rice	nucleus, plastid	75.36	76.47
GSMUA_Achr2P00020_001	Banana	plastid	74.88	74.16
CDY47469	Canola	cytosol	47.83	57.89
CDY26779	Canola	cytosol	47.83	57.89
CDX72741	Canola	cytosol	47.83	57.56
CDX69094	Canola	cytosol	47.83	57.56
CDY22414	Canola	cytosol, extracellular	47.34	56.98
CDY12100	Canola	cytosol	47.34	56.98
CDX90292	Canola	cytosol	47.34	56.98
CDY27248	Canola	cytosol	47.83	54.4
CDX72175	Canola	cytosol	47.83	54.1
CDY58941	Canola	endoplasmic reticulum	46.86	48.26
CDY55458	Canola	endoplasmic reticulum	46.86	48.26
CDX71155	Canola	endoplasmic reticulum	46.38	47.76
CDY61026	Canola	endoplasmic reticulum	46.38	47.76
CDX80340	Canola	endoplasmic reticulum	45.89	46.57
CDY52123	Canola	endoplasmic reticulum	45.89	46.57
Zm00001d013010_P002	Maize	plastid	67.63	45.45
CDX72190	Canola	endoplasmic reticulum	47.83	44.2
CDY27255	Canola	endoplasmic reticulum	47.83	44.2
CDY58761	Canola	plastid	47.34	37.98
CDX76611	Canola	plastid	46.38	37.94
CDY11395	Canola	plastid	46.86	37.6
CDX93994	Canola	plastid	47.34	37.55
CDX75476	Canola	endoplasmic reticulum	39.61	36.61
CDX69100	Canola	endoplasmic reticulum	39.61	36.61
CDX76307	Canola	endoplasmic reticulum	38.65	35.87
CDY17501	Canola	endoplasmic reticulum	38.16	35.11
CDX78508	Canola	plastid	43.0	34.77
CDX70495	Canola	plastid	43.0	34.63
CDY36653	Canola	cytosol	46.38	26.59
CDX71247	Canola	cytosol	46.38	26.59
CDY53714	Canola	nucleus	45.89	17.09
CDX93909	Canola	nucleus	45.89	15.52
CDX68845	Canola	nucleus	38.65	10.46
CDX75243	Canola	nucleus	38.16	10.33

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	GO:A0A078FZ98	UniProt:A0A078FZ98	EnsemblPlants:CDY18371	ProteinID:CDY18371
ProteinID:CDY18371.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00005358001	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF58	SUPFAM:SSF50891
UniParc:UPI0004EED84C	SEG:seg	:	:	:	:

Description

BnaA04g22160DPeptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078FZ98]

Coordinates

chrLK032085:+:99125..100895

Molecular Weight (calculated)

22318.9 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.173

Length

207 amino acids

Sequence
(BLAST)

001: MSSGAGGIVA APASAPSSGG GGNVEWHVRP PNPKNPVVFF DVSIGGIPAG RIKMELFADI APKTAENFRQ FCTGELRKAG KPLGYKECQF HRVIKDFMIQ
101: SGDFLKNDGN GCMSIYGHKF DDENFTAKHT GPGLLSMANS GPDTNGCQYS YLFFISCAKC EWLDNKHVVF GRVLGDGLLV MRKIENVAVG PNNRPKLAVV
201: ITECGEM

Best Arabidopsis Sequence Match ( AT2G38730.1 )
(BLAST)

001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM

Arabidopsis Description

CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.