Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011568.1-P | Field mustard | cytosol | 97.67 | 98.25 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 73.26 | 83.44 |
| AT4G34870.1 | Thale cress | cytosol | 83.14 | 83.14 |
| CDY12100 | Canola | cytosol | 83.14 | 83.14 |
| CDX90292 | Canola | cytosol | 83.14 | 83.14 |
| Zm00001d050635_P001 | Maize | plastid | 81.98 | 82.46 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 81.4 | 81.87 |
| CDY47469 | Canola | cytosol | 81.4 | 81.87 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 81.4 | 81.87 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 80.81 | 81.29 |
| CDY26779 | Canola | cytosol | 80.81 | 81.29 |
| EES04388 | Sorghum | cytosol | 80.23 | 80.7 |
| CDX72741 | Canola | cytosol | 80.23 | 80.23 |
| CDY22414 | Canola | cytosol, extracellular | 80.23 | 80.23 |
| Zm00001d016661_P001 | Maize | plastid | 79.65 | 79.65 |
| EES05164 | Sorghum | cytosol | 79.65 | 79.65 |
| Zm00001d016660_P001 | Maize | cytosol | 79.65 | 79.65 |
| Os02t0121300-01 | Rice | extracellular | 79.07 | 79.07 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 69.19 | 71.26 |
| CDY27248 | Canola | cytosol | 74.42 | 70.33 |
| CDX72175 | Canola | cytosol | 73.26 | 68.85 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 73.84 | 67.2 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 80.23 | 66.99 |
| CDY58941 | Canola | endoplasmic reticulum | 69.77 | 59.7 |
| CDX71155 | Canola | endoplasmic reticulum | 69.77 | 59.7 |
| CDY55458 | Canola | endoplasmic reticulum | 69.77 | 59.7 |
| CDY61026 | Canola | endoplasmic reticulum | 69.19 | 59.2 |
| CDX80340 | Canola | endoplasmic reticulum | 68.6 | 57.84 |
| CDY52123 | Canola | endoplasmic reticulum | 68.6 | 57.84 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 68.02 | 53.42 |
| CDX72190 | Canola | endoplasmic reticulum | 68.02 | 52.23 |
| CDY27255 | Canola | endoplasmic reticulum | 68.02 | 52.23 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 66.28 | 52.05 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 72.09 | 50.2 |
| CDX91486 | Canola | cytosol | 56.98 | 49.0 |
| CDX74892 | Canola | cytosol, plastid | 57.56 | 48.53 |
| CDX93307 | Canola | plastid | 57.56 | 48.29 |
| CDY18371 | Canola | cytosol, plastid | 57.56 | 47.83 |
| CDX69100 | Canola | endoplasmic reticulum | 58.72 | 45.09 |
| CDX75476 | Canola | endoplasmic reticulum | 58.72 | 45.09 |
| CDX76307 | Canola | endoplasmic reticulum | 56.4 | 43.5 |
| CDY17501 | Canola | endoplasmic reticulum | 55.81 | 42.67 |
| CDX78508 | Canola | plastid | 61.63 | 41.41 |
| CDX70495 | Canola | plastid | 61.63 | 41.25 |
| CDY58761 | Canola | plastid | 61.05 | 40.7 |
| CDX76611 | Canola | plastid | 59.3 | 40.32 |
| CDX93994 | Canola | plastid | 61.05 | 40.23 |
| CDY11395 | Canola | plastid | 59.88 | 39.92 |
| CDY36653 | Canola | cytosol | 60.47 | 28.81 |
| CDX71247 | Canola | cytosol | 60.47 | 28.81 |
| CDY53714 | Canola | nucleus | 64.53 | 19.96 |
| CDX93909 | Canola | nucleus | 65.7 | 18.46 |
| CDX68845 | Canola | nucleus | 50.58 | 11.37 |
| CDX75243 | Canola | nucleus | 50.0 | 11.24 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078BYT0 | EnsemblPlants:CDX69094 | ProteinID:CDX69094 | ProteinID:CDX69094.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0048046 | EnsemblPlantsGene:GSBRNA2T00130874001 | InterPro:IPR002130 |
| InterPro:IPR029000 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 |
| PANTHER:PTHR11071 | PANTHER:PTHR11071:SF382 | SUPFAM:SSF50891 | UniParc:UPI0001BA41C1 | SEG:seg | : |
Description
BnaC01g03590D
Coordinates
chrLK031789:+:2891212..2892579
Molecular Weight (calculated)
18176.8 Da
IEP (calculated)
8.950
GRAVY (calculated)
-0.241
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPRVFFDM TLDGAPAGRI VMELYKDTTP NTAENFRALC TGEKGVGKKG KPLHFKGSAF HRVIPGFMCQ GGDFTAGNGT GGESIYGDKF KDENFAKKHT
101: GAGILSMANS GPNTNGSQFF ICTAETSWLD GKHVVFGKVV EGMEVVKAIE KVGSSSGTTK KKVVVADCGQ VA
101: GAGILSMANS GPNTNGSQFF ICTAETSWLD GKHVVFGKVV EGMEVVKAIE KVGSSSGTTK KKVVVADCGQ VA
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.