Factsheet for Bra011568.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69094	Canola	cytosol	98.25	97.67
GSMUA_Achr3P12630_001	Banana	plasma membrane, unclear	74.85	84.77
AT4G34870.1	Thale cress	cytosol	84.21	83.72
Zm00001d050635_P001	Maize	plastid	83.63	83.63
Bra010728.1-P	Field mustard	cytosol	83.63	83.14
Bra037296.1-P	Field mustard	cytosol	83.04	83.04
EES04388	Sorghum	cytosol	82.46	82.46
TraesCS6A01G068900.1	Wheat	cytosol	81.87	81.87
TraesCS6D01G066700.1	Wheat	golgi, plastid	81.87	81.87
TraesCS6B01G093100.2	Wheat	cytosol	81.29	81.29
Zm00001d016660_P001	Maize	cytosol	81.29	80.81
EES05164	Sorghum	cytosol	81.29	80.81
Zm00001d016661_P001	Maize	plastid	81.29	80.81
Bra033574.1-P	Field mustard	cytosol	80.7	80.23
Os02t0121300-01	Rice	extracellular	80.12	79.65
TraesCS6A01G405900.1	Wheat	cytosol	70.18	71.86
Bra007214.1-P	Field mustard	cytosol	76.02	71.43
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	74.27	67.2
HORVU6Hr1G012570.2	Barley	cytosol	80.12	66.5
Bra018353.1-P	Field mustard	endoplasmic reticulum	70.18	59.7
Bra002623.1-P	Field mustard	cytosol	68.42	59.69
Bra006748.1-P	Field mustard	endoplasmic reticulum	69.59	59.2
TraesCS6B01G450300.1	Wheat	cytosol	69.59	54.34
TraesCS6B01G450400.1	Wheat	cytosol	67.84	52.97
Bra007200.1-P	Field mustard	endoplasmic reticulum	67.84	51.79
TraesCS6A01G405800.1	Wheat	cytosol	73.68	51.01
Bra005088.1-P	Field mustard	plastid	57.89	48.53
Bra017105.1-P	Field mustard	plastid	58.48	48.31
Bra011574.1-P	Field mustard	endoplasmic reticulum	59.65	45.54
Bra034667.1-P	Field mustard	endoplasmic reticulum	56.73	43.5
Bra006182.1-P	Field mustard	plastid	61.99	41.25
Bra014414.1-P	Field mustard	plastid	60.23	39.92
Bra007655.1-P	Field mustard	plastid	59.65	39.69
Bra015237.1-P	Field mustard	cytosol	61.4	29.09
Bra040447.1-P	Field mustard	nucleus	65.5	21.17
Bra011346.1-P	Field mustard	nucleus	50.29	11.14

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra011568	EnsemblPlants:Bra011568.1	EnsemblPlants:Bra011568.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005829	GO:GO:0005886	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016020	GO:GO:0016853	GO:GO:0019538	GO:GO:0048046	InterPro:IPR002130	InterPro:IPR029000
UniProt:M4D511	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF382	SUPFAM:SSF50891	UniParc:UPI0002545509	SEG:seg	:

Description

AT4G34870 (E=3e-070) ROC5, ATCYP1 | ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase

Coordinates

chrA01:-:1645905..1646420

Molecular Weight (calculated)

18090.7 Da

IEP (calculated)

8.643

GRAVY (calculated)

-0.204

Length

171 amino acids

Sequence
(BLAST)

001: MANPRVFFDM TLDGAPAGRI VMELYADTTP NTAENFRALC TGEKGVGKKG KPLHFKGSAF HRVIPGFMCQ GGDFTAGNGT GGESIYGDKF KDENFVKKHT
101: GAGILSMANS GPNTNGSQFF ICTAETSWLD GKHVVFGKVV EGMEVVKAIE KVGSSSGTTK KKVVVADCGQ I

Best Arabidopsis Sequence Match ( AT4G34870.1 )
(BLAST)

001: MSNPRVFFDM SLSGTPIGRI EMELFADTTP NTAENFRALC TGEKGMGKLG KPLHFKGSIF HRVIPGFMCQ GGDFTAKNGT GGESIYGAKF KDENFIKKHT
101: GAGILSMANS GPNTNGSQFF ICTDKTSWLD GKHVVFGQVV KGLDVVKAIE KVGSDSGKTS KVVTITDCGQ LS

Arabidopsis Description

CYP18-4Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UWH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.