Factsheet for Bra011346.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75243	Canola	nucleus	96.24	97.12
AT4G32420.6	Thale cress	nucleus	78.76	72.64
VIT_04s0008g05090.t01	Wine grape	nucleus	55.57	53.89
Solyc08g067090.2.1	Tomato	nucleus	53.63	51.17
KRH61803	Soybean	nucleus	55.57	50.89
KRH52477	Soybean	nucleus	55.57	50.47
Bra011568.1-P	Field mustard	cytosol	11.14	50.29
Bra007214.1-P	Field mustard	cytosol	11.66	49.45
Bra010728.1-P	Field mustard	cytosol	11.01	49.42
Bra033574.1-P	Field mustard	cytosol	11.01	49.42
Bra037296.1-P	Field mustard	cytosol	10.75	48.54
PGSC0003DMT400059575	Potato	nucleus	43.65	48.28
Bra018353.1-P	Field mustard	endoplasmic reticulum	11.79	45.27
Bra002623.1-P	Field mustard	cytosol	11.27	44.39
KRH15996	Soybean	nucleus	48.32	43.93
Bra006748.1-P	Field mustard	endoplasmic reticulum	11.27	43.28
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	37.82	43.0
HORVU6Hr1G037500.21	Barley	nucleus	44.82	42.04
TraesCS6A01G176900.1	Wheat	nucleus	44.56	41.8
TraesCS6B01G208900.2	Wheat	cytosol	44.82	40.75
TraesCS6D01G167200.3	Wheat	cytosol	44.43	40.4
OQU84603	Sorghum	nucleus	43.52	40.38
Zm00001d053620_P016	Maize	nucleus	42.49	40.05
Bra007200.1-P	Field mustard	endoplasmic reticulum	11.4	39.29
GSMUA_Achr10P...	Banana	nucleus	41.97	38.94
Bra005088.1-P	Field mustard	plastid	10.23	38.73
Zm00001d015729_P005	Maize	nucleus	42.75	38.42
Bra017105.1-P	Field mustard	plastid	10.23	38.16
Bra040447.1-P	Field mustard	nucleus	25.78	37.62
GSMUA_Achr2P15900_001	Banana	nucleus	40.28	37.42
Bra011574.1-P	Field mustard	endoplasmic reticulum	10.49	36.16
Bra034667.1-P	Field mustard	endoplasmic reticulum	10.23	35.43
Bra007655.1-P	Field mustard	plastid	9.97	29.96
Bra014414.1-P	Field mustard	plastid	9.84	29.46
Bra006182.1-P	Field mustard	plastid	9.33	28.02
Bra015237.1-P	Field mustard	cytosol	12.82	27.42

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra011346	EnsemblPlants:Bra011346.1	EnsemblPlants:Bra011346.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	UniProt:M4D4E2	PFAM:PF00160	PRINTS:PR00153	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF255	SUPFAM:SSF50891	UniParc:UPI0002546436	SEG:seg	:

Description

AT4G32420 (E=6e-101) | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein

Coordinates

chrA01:+:2635509..2639814

Molecular Weight (calculated)

87755.3 Da

IEP (calculated)

12.279

GRAVY (calculated)

-1.422

Length

772 amino acids

Sequence
(BLAST)

001: MAKKKNPQVY MDVCIDGDPA ETMVFELFPD VAPKTSENFR ALCTGEKGIG PRSGKPLHYK GSFFHRILKG SSAQAGDFVS RDGTAGESIY AGKFPDESPK
101: LRHDERGLLS MDVAERDKFG SHFHITFRPN HQLDRKNVVF GKLIQGKEVL KKIEHVGDEE GKPTVTVKII RCGEYSGDKK KNVIDDRKRS KHKKSSSERR
201: KKRRRHSSSE SESSSDSETD SSESDSESDS DLSSDLSSSS HERGKKRKRS SRKDKHRRSK RRDKRHEKKR RIRDKRSKRK SRRSPDNLIG EEGNSESDAN
301: VDIGGKTRKP RVSNRTGNSP LEFQKEAESL HQDKKEGPDL LDKDDDASDR QHDIVDDHSG KSRSWSLSPK RKTSLSPRRS PSKSPSLSPR RKVKNLRGKS
401: TESEKLGRLM RRSISKSVSR SPVRMKGGKD ISRSPSRSIS RSPLRSPVRD ISRSPVRSRN ARSSSRSPVR SASRGSLGRG PLRRARRSPS RSPVRSSRRS
501: LSRSPSISPR RSVSRSPVRS YMKSVSRSPI RSPRRSVSRS PVRSSRKSVS RSPIRSSRRS ISRSPVGGER RRRISRSPIQ ARRRSPFGRR RSLSRSASPD
601: GRIRRGRGFS QRYSYARRFR ASPTPDRSPY RLSDRSDRDR FRSHRRYSPR RFRSPLRART PPRLRRRRSR SVSSGPRHRR RYSRSPIRSR SPYRKKRRSP
701: SPASRSPIRS RSPYRKRRSP SPASRSPSPS GSRSRSYSKS PIGTGKARSP SKSSSSSSGN SSGGKKRLVA YD

Best Arabidopsis Sequence Match ( AT4G32420.6 )
(BLAST)

001: MAKKKNPQVF MDVSIDGDPA ETMVFELFPE VAPKTSENFR ALCTGEKGIG PRSGKPLHYK GSFFHRIMKG SSAQAGDFVN RNGTAGESIY AGKFPDESPK
101: LRHEETGLLS MSIADRDKFG SHFHITFRPN QQLDRNNVVF GKLIQGKEIL KKIERVGDEE GKPTVSVKII RCGEYSGDKK KSDGKKNGKH KKSLRVRRKK
201: RRRHSSSESE SSSDSETDSS ESDSESDSDL SSPSFLSSSS HERQKKRKRS SKKDKHRRSK QRDKRHEKKR SMRDKRPKRK SRRSPDSLED SNSGSEASLS
301: DVNVEIGAKK RKHRVSRRTG NSAPAVEKEA ESLHQGKRKG PDLLENRGLR SNGISDAASE QISDRQPDIV DDHPSKSRSR SLSPKRTVSK STSVSPRRSQ
401: SKSPSSSPRW NGGRSPAKGS RQVKNLTNSR RESPGSEEKG RHVRRSPTKS VSRSPVRVKK ERDISRSPSK SLSRSPLRSP KRVISRSPVR GRIARSPSRS
501: PVRSASRGSL GRGPLRRSSR RSPSRSPVRS SRRSLSRSPI QLSRRSLSRS PTRLSRRSLS RSPIRSPRKS VSRSPVRSSR KSVSRSPVRS SRRRISRSPV
601: RSSRKSVSRS PIRLSRRSIS RSPIRLSRRS ISRSPVRGRR RISRSPVPAR RRSVRPRSPP PDRRRSLSRS ASPNGRIRRG RGFSQRFSYA RRYRTSPSPD
701: RSPYRFSDRS DRDRFRSRRR FSPSRFRSPL RGRTPPRYRR RSRSVSPGLC YRNRRYSRSP IRSRSPPYRK RRSPSASHSL SPSRSRSRSK SYSKSPIGTG
801: KARSVSRSPS KARSPSKSDS TSSDNSPGGK KGLVAYD

Arabidopsis Description

CYP95Peptidyl-prolyl cis-trans isomerase CYP95 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.