Factsheet for Bra006748.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61026	Canola	endoplasmic reticulum	99.5	99.5
CDX71155	Canola	endoplasmic reticulum	98.51	98.51
AT5G58710.1	Thale cress	endoplasmic reticulum	92.54	91.18
Bra002623.1-P	Field mustard	cytosol	86.07	88.27
KRG98290	Soybean	endoplasmic reticulum	88.06	86.76
KRH30309	Soybean	endoplasmic reticulum	87.56	86.27
Bra018353.1-P	Field mustard	endoplasmic reticulum	84.58	84.58
Bra033574.1-P	Field mustard	cytosol	61.69	72.09
Bra037296.1-P	Field mustard	cytosol	61.19	71.93
Bra010728.1-P	Field mustard	cytosol	61.19	71.51
Bra011568.1-P	Field mustard	cytosol	59.2	69.59
GSMUA_Achr7P04880_001	Banana	cytosol	64.68	67.01
Os06t0708400-01	Rice	plasma membrane	68.16	65.87
Bra007214.1-P	Field mustard	cytosol	58.21	64.29
Bra007200.1-P	Field mustard	endoplasmic reticulum	71.64	64.29
OQU77068	Sorghum	endoplasmic reticulum	66.67	62.91
EER88931	Sorghum	endoplasmic reticulum	65.67	59.73
EER88932	Sorghum	endoplasmic reticulum	64.18	58.37
Bra011574.1-P	Field mustard	endoplasmic reticulum	57.71	51.79
Bra034667.1-P	Field mustard	endoplasmic reticulum	53.73	48.43
Bra005088.1-P	Field mustard	plastid	48.26	47.55
Bra017105.1-P	Field mustard	plastid	48.26	46.86
Bra007655.1-P	Field mustard	plastid	58.21	45.53
Bra006182.1-P	Field mustard	plastid	58.21	45.53
Bra014414.1-P	Field mustard	plastid	57.71	44.96
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	52.24	35.47
Bra015237.1-P	Field mustard	cytosol	49.25	27.42
Bra040447.1-P	Field mustard	nucleus	52.24	19.85
Bra011346.1-P	Field mustard	nucleus	43.28	11.27

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra006748	EnsemblPlants:Bra006748.1	EnsemblPlants:Bra006748.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4CRA7	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384
SUPFAM:SSF50891	SignalP:SignalP-noTM	UniParc:UPI000254030C	SEG:seg	:	:

Description

AT5G58710 (E=4e-088) ROC7 | ROC7; peptidyl-prolyl cis-trans isomerase

Coordinates

chrA03:-:4888094..4889446

Molecular Weight (calculated)

21759.4 Da

IEP (calculated)

9.873

GRAVY (calculated)

-0.172

Length

201 amino acids

Sequence
(BLAST)

001: MARSVKLLLW SLLLLGTLTA IQAKKSKEKI THKVYFDVEI NGKEAGRIVM GLFGKTVPKT AENFRALCTG EKGMGKKGKA LHYKGSSFHR IIPSFMLQGG
101: DFTDGNGMGG ESIYGEKFAD ENFKLKHTGP GYLSMANAGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVTG MDVVYKIEAE GSQSGTPKSK VVIVDSGELP
201: I

Best Arabidopsis Sequence Match ( AT5G58710.1 )
(BLAST)

001: MASSVTLLLW SLLLLGTLSA IQAKKSKENL KEITHKVYFD VEIDGKAAGR IVMGLFGKTV PKTVENFRAL CTGEKGIGKN GKALHYKGSS FHRIIPSFML
101: QGGDFTHGNG MGGESIYGEK FADENFKLKH TGPGFLSMAN AGQDTNGSQF FITTVTTSWL DGRHVVFGKV VTGMDVVYKV EAEGNQSGTP KSKVVIVDSG
201: ELPL

Arabidopsis Description

CYP20-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UBF4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.