Factsheet for Bra011574.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75476	Canola	endoplasmic reticulum	99.55	99.55
CDX69100	Canola	endoplasmic reticulum	98.21	98.21
AT4G34960.1	Thale cress	endoplasmic reticulum	94.64	94.64
Bra034667.1-P	Field mustard	endoplasmic reticulum	85.71	86.1
VIT_03s0038g02200.t01	Wine grape	endoplasmic reticulum	75.45	75.78
PGSC0003DMT400015869	Potato	cytosol	64.73	75.52
KRH60706	Soybean	endoplasmic reticulum	78.12	75.43
KRH29272	Soybean	endoplasmic reticulum	78.57	74.58
KRH24294	Soybean	endoplasmic reticulum	77.68	73.73
GSMUA_Achr1P07610_001	Banana	endoplasmic reticulum	69.64	72.22
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	67.41	69.91
Solyc01g111360.2.1	Tomato	endoplasmic reticulum	70.54	69.3
Zm00001d022631_P002	Maize	plastid	66.52	68.98
EER97099	Sorghum	endoplasmic reticulum	66.52	68.98
TraesCS5D01G334800.2	Wheat	endoplasmic reticulum	66.07	68.52
TraesCS5A01G328900.1	Wheat	endoplasmic reticulum	66.07	68.52
TraesCS5B01G329000.1	Wheat	endoplasmic reticulum	66.07	68.52
Os09t0537600-01	Rice	endoplasmic reticulum	65.18	67.91
Bra018353.1-P	Field mustard	endoplasmic reticulum	54.91	61.19
Bra002623.1-P	Field mustard	cytosol	52.23	59.69
Bra011568.1-P	Field mustard	cytosol	45.54	59.65
Bra033574.1-P	Field mustard	cytosol	45.09	58.72
Bra010728.1-P	Field mustard	cytosol	45.09	58.72
Bra006748.1-P	Field mustard	endoplasmic reticulum	51.79	57.71
Bra037296.1-P	Field mustard	cytosol	43.75	57.31
Bra007214.1-P	Field mustard	cytosol	41.96	51.65
Bra007200.1-P	Field mustard	endoplasmic reticulum	51.34	51.34
Bra006182.1-P	Field mustard	plastid	48.21	42.02
Bra005088.1-P	Field mustard	plastid	37.05	40.69
Bra017105.1-P	Field mustard	plastid	37.05	40.1
Bra007655.1-P	Field mustard	plastid	42.86	37.35
Bra014414.1-P	Field mustard	plastid	42.86	37.21
Bra015237.1-P	Field mustard	cytosol	42.86	26.59
Bra040447.1-P	Field mustard	nucleus	43.75	18.53
Bra011346.1-P	Field mustard	nucleus	36.16	10.49

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra011574	EnsemblPlants:Bra011574.1	EnsemblPlants:Bra011574.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4D517	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF203
SUPFAM:SSF50891	TMHMM:TMhelix	UniParc:UPI0002545503	SEG:seg	:	:

Description

AT4G34960 (E=3e-113) | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative

Coordinates

chrA01:-:1618625..1620208

Molecular Weight (calculated)

24599.6 Da

IEP (calculated)

7.704

GRAVY (calculated)

-0.146

Length

224 amino acids

Sequence
(BLAST)

001: MRREISFLLQ PRCLLLLVAL TIFLIFALFN TGKEEEKQVI QDFEITHRVF LDVDIDGQRL GRIVIGLYGT AVPKTVENFR ALCTGEKGKS SSGKPLHYKG
101: TPFHRIISGF VIQGGDIIHG DGKGSESIYG GTFPDENFKI KHSHAGVVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVFG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER

Best Arabidopsis Sequence Match ( AT4G34960.1 )
(BLAST)

001: MRREISFLLQ PRCLLLLVAL TIFLVFALFN TGKDEEKQVI EDHEITNRVF LDVDIDGQRL GRIVIGLYGT VVPKTVENFR ALCTGEKGKT SSGKPLHYKG
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER

Arabidopsis Description

CYP21-1Peptidyl-prolyl cis-trans isomerase CYP21-1 [Source:UniProtKB/Swiss-Prot;Acc:O49605]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.