Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 2
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g111360.2.1 | Tomato | endoplasmic reticulum | 99.48 | 83.77 |
| CDX69100 | Canola | endoplasmic reticulum | 76.56 | 65.62 |
| CDX75476 | Canola | endoplasmic reticulum | 76.04 | 65.18 |
| VIT_03s0038g02200.t01 | Wine grape | endoplasmic reticulum | 75.52 | 65.02 |
| Bra011574.1-P | Field mustard | endoplasmic reticulum | 75.52 | 64.73 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 74.48 | 63.84 |
| Os09t0537600-01 | Rice | endoplasmic reticulum | 71.35 | 63.72 |
| HORVU5Hr1G083310.3 | Barley | endoplasmic reticulum | 71.35 | 63.43 |
| Zm00001d022631_P002 | Maize | plastid | 70.83 | 62.96 |
| EER97099 | Sorghum | endoplasmic reticulum | 70.83 | 62.96 |
| GSMUA_Achr1P07610_001 | Banana | endoplasmic reticulum | 70.83 | 62.96 |
| KRH60706 | Soybean | endoplasmic reticulum | 76.04 | 62.93 |
| TraesCS5A01G328900.1 | Wheat | endoplasmic reticulum | 70.31 | 62.5 |
| KRH29272 | Soybean | endoplasmic reticulum | 76.56 | 62.29 |
| TraesCS5D01G334800.2 | Wheat | endoplasmic reticulum | 69.79 | 62.04 |
| TraesCS5B01G329000.1 | Wheat | endoplasmic reticulum | 69.79 | 62.04 |
| KRH24294 | Soybean | endoplasmic reticulum | 76.04 | 61.86 |
| Bra034667.1-P | Field mustard | endoplasmic reticulum | 71.35 | 61.44 |
| CDX76307 | Canola | endoplasmic reticulum | 71.35 | 61.44 |
| CDY17501 | Canola | endoplasmic reticulum | 71.35 | 60.89 |
| PGSC0003DMT400073838 | Potato | cytosol | 48.44 | 53.14 |
| PGSC0003DMT400011344 | Potato | cytosol | 47.4 | 52.91 |
| PGSC0003DMT400004125 | Potato | extracellular | 46.88 | 52.63 |
| PGSC0003DMT400078234 | Potato | endoplasmic reticulum | 55.73 | 51.69 |
| PGSC0003DMT400016955 | Potato | endoplasmic reticulum | 54.69 | 45.85 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 42.71 | 43.16 |
| PGSC0003DMT400013412 | Potato | extracellular, plastid | 51.04 | 39.52 |
| PGSC0003DMT400066358 | Potato | cytosol | 49.48 | 26.24 |
| PGSC0003DMT400026079 | Potato | cytosol | 46.88 | 24.93 |
| PGSC0003DMT400049782 | Potato | nucleus | 52.08 | 15.2 |
| PGSC0003DMT400059575 | Potato | nucleus | 13.54 | 3.72 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | UniProt:M1A6R1 |
| PFAM:PF00160 | EnsemblPlantsGene:PGSC0003DMG400006200 | PGSC:PGSC0003DMG400006200 | EnsemblPlants:PGSC0003DMT400015869 | PIRSF:PIRSF001467 | PRINTS:PR00153 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF203 | SUPFAM:SSF50891 | UniParc:UPI0002957318 | : |
Description
Peptidyl-prolyl cis-trans isomerase [Source:PGSC_GENE;Acc:PGSC0003DMG400006200]
Coordinates
chr1:+:87335620..87340245
Molecular Weight (calculated)
20785.8 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.231
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDEVYEVTH RVFLDVDIDK QRAGRIVIGL YGQVVPKTVE NFRALCTGEM GKTADGISLH YKGKPFHRII PGFMIQGGDI VSADGRGNIS IYGGPFPDEN
101: LKIKHSHAGV ISMVNSGPNS NGCQFFIPTV KASWLDGEHV VFGKVIEGMD TVYAIEGGAG TYSGKPRKKV LIADSGEIPK SKWDEDNQSS AS
101: LKIKHSHAGV ISMVNSGPNS NGCQFFIPTV KASWLDGEHV VFGKVIEGMD TVYAIEGGAG TYSGKPRKKV LIADSGEIPK SKWDEDNQSS AS
001: MRREISFLLQ PRCLLLLVAL TIFLVFALFN TGKDEEKQVI EDHEITNRVF LDVDIDGQRL GRIVIGLYGT VVPKTVENFR ALCTGEKGKT SSGKPLHYKG
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER
Arabidopsis Description
CYP21-1Peptidyl-prolyl cis-trans isomerase CYP21-1 [Source:UniProtKB/Swiss-Prot;Acc:O49605]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.