Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 98.26 | 98.26 |
| PGSC0003DMT400004125 | Potato | extracellular | 91.28 | 91.81 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 86.63 | 86.63 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 86.63 | 86.63 |
| KRH51416 | Soybean | cytosol | 86.05 | 86.05 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 84.88 | 84.88 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 83.72 | 83.72 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 73.26 | 83.44 |
| CDY12100 | Canola | cytosol | 83.14 | 83.14 |
| CDX90292 | Canola | cytosol | 83.14 | 83.14 |
| Bra010728.1-P | Field mustard | cytosol | 83.14 | 83.14 |
| CDY22414 | Canola | cytosol, extracellular | 82.56 | 82.56 |
| CDX72741 | Canola | cytosol | 82.56 | 82.56 |
| Bra033574.1-P | Field mustard | cytosol | 82.56 | 82.56 |
| AT4G38740.1 | Thale cress | cytosol | 82.56 | 82.56 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 80.23 | 80.7 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 79.65 | 80.12 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 79.65 | 80.12 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 79.65 | 79.65 |
| Zm00001d050635_P001 | Maize | plastid | 79.07 | 79.53 |
| EES05164 | Sorghum | cytosol | 79.07 | 79.07 |
| Zm00001d016661_P001 | Maize | plastid | 78.49 | 78.49 |
| Zm00001d016660_P001 | Maize | cytosol | 78.49 | 78.49 |
| AT2G21130.1 | Thale cress | cytosol | 78.49 | 77.59 |
| EES04388 | Sorghum | cytosol | 76.74 | 77.19 |
| Os02t0121300-01 | Rice | extracellular | 75.58 | 75.58 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 70.93 | 73.05 |
| PGSC0003DMT400073838 | Potato | cytosol | 72.09 | 70.86 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 80.23 | 66.99 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 72.09 | 65.61 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 62.79 | 56.84 |
| PGSC0003DMT400078234 | Potato | endoplasmic reticulum | 68.02 | 56.52 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 68.6 | 53.88 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 65.7 | 51.6 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 73.26 | 51.01 |
| PGSC0003DMT400016955 | Potato | endoplasmic reticulum | 66.28 | 49.78 |
| PGSC0003DMT400015869 | Potato | cytosol | 52.91 | 47.4 |
| PGSC0003DMT400013412 | Potato | extracellular, plastid | 62.79 | 43.55 |
| PGSC0003DMT400066358 | Potato | cytosol | 59.3 | 28.18 |
| PGSC0003DMT400026079 | Potato | cytosol | 56.4 | 26.87 |
| PGSC0003DMT400049782 | Potato | nucleus | 66.28 | 17.33 |
| PGSC0003DMT400059575 | Potato | nucleus | 13.95 | 3.44 |
Protein Annotations
| EntrezGene:102600807 | MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | UniProt:M0ZZF1 | PFAM:PF00160 | EnsemblPlantsGene:PGSC0003DMG400004440 | PGSC:PGSC0003DMG400004440 |
| EnsemblPlants:PGSC0003DMT400011344 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF382 | SUPFAM:SSF50891 | UniParc:UPI00029490A6 | RefSeq:XP_006367332.1 | SEG:seg | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400004440]
Coordinates
chr10:+:46432801..46433603
Molecular Weight (calculated)
17890.4 Da
IEP (calculated)
8.493
GRAVY (calculated)
-0.121
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKVFFDL TIGGQAAGRV VMELFNDATP KTAENFRALC TGEKGVGKTG KPLHYKGSSF HRVIPGFMCQ GGDFTAGNGT GGESIYGSKF ADENFVKKHT
101: GPGILSMANA GPGTNGSQFF VCTAKTEWLD GKHVVFGQVV EGMDVIKKAE AVGSSSGKCS KAVVVADCGQ LS
101: GPGILSMANA GPGTNGSQFF VCTAKTEWLD GKHVVFGQVV EGMDVIKKAE AVGSSSGKCS KAVVVADCGQ LS
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.