Subcellular Localization
min:
: max
Winner_takes_all: unclear, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
extracellular: 29876421 |
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011344 | Potato | cytosol | 98.26 | 98.26 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 91.86 | 92.4 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 86.63 | 86.63 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 86.63 | 86.63 |
| KRH51416 | Soybean | cytosol | 86.05 | 86.05 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 84.88 | 84.88 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 83.72 | 83.72 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 73.26 | 83.44 |
| CDY12100 | Canola | cytosol | 83.14 | 83.14 |
| CDX90292 | Canola | cytosol | 83.14 | 83.14 |
| Bra010728.1-P | Field mustard | cytosol | 83.14 | 83.14 |
| CDY22414 | Canola | cytosol, extracellular | 82.56 | 82.56 |
| CDX72741 | Canola | cytosol | 82.56 | 82.56 |
| Bra033574.1-P | Field mustard | cytosol | 82.56 | 82.56 |
| AT4G38740.1 | Thale cress | cytosol | 81.98 | 81.98 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 80.23 | 80.7 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 79.65 | 80.12 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 79.65 | 80.12 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 79.65 | 79.65 |
| Zm00001d050635_P001 | Maize | plastid | 79.07 | 79.53 |
| EES05164 | Sorghum | cytosol | 79.07 | 79.07 |
| AT2G21130.1 | Thale cress | cytosol | 79.65 | 78.74 |
| Zm00001d016661_P001 | Maize | plastid | 78.49 | 78.49 |
| Zm00001d016660_P001 | Maize | cytosol | 78.49 | 78.49 |
| EES04388 | Sorghum | cytosol | 77.91 | 78.36 |
| Os02t0121300-01 | Rice | extracellular | 75.58 | 75.58 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 70.93 | 73.05 |
| Solyc11g006070.1.1 | Tomato | cytosol, extracellular, unclear | 64.53 | 72.55 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 80.23 | 66.99 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 72.09 | 65.61 |
| Solyc01g096520.2.1 | Tomato | cytosol, nucleus, plastid | 62.21 | 56.32 |
| Solyc06g076970.2.1 | Tomato | nucleus | 67.44 | 56.04 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 68.6 | 53.88 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 65.7 | 51.6 |
| Solyc06g051650.2.1 | Tomato | endoplasmic reticulum | 66.86 | 51.11 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 73.26 | 51.01 |
| Solyc01g009990.2.1 | Tomato | plastid | 62.79 | 43.55 |
| Solyc01g111360.2.1 | Tomato | endoplasmic reticulum | 54.65 | 41.23 |
| Solyc01g108340.2.1 | Tomato | cytosol | 60.47 | 28.73 |
| Solyc02g090480.2.1 | Tomato | cytosol | 56.98 | 27.15 |
| Solyc09g065720.2.1 | Tomato | nucleus | 65.7 | 17.12 |
| Solyc08g067090.2.1 | Tomato | nucleus | 48.26 | 10.26 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 |
| InterPro:IPR029000 | UniProt:K4D184 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF382 | SUPFAM:SSF50891 | EnsemblPlantsGene:Solyc10g054910.1 | EnsemblPlants:Solyc10g054910.1.1 |
| UniParc:UPI0002769317 | SEG:seg | : | : | : | : |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:K4D184]
Coordinates
chr10:+:56066221..56066739
Molecular Weight (calculated)
17874.4 Da
IEP (calculated)
8.493
GRAVY (calculated)
-0.101
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKVFFDL TIGGQAAGRV VMELFNDATP KTAENFRALC TGEKGVGKAG KPLHYKGSSF HRVIPGFMCQ GGDFTAGNGT GGESIYGSKF ADENFVKKHT
101: GPGILSMANA GPGTNGSQFF ICTAKTEWLD GKHVVFGQVV EGMDVIKKAE AVGSSSGKCS KAVVVADCGQ IS
101: GPGILSMANA GPGTNGSQFF ICTAKTEWLD GKHVVFGQVV EGMDVIKKAE AVGSSSGKCS KAVVVADCGQ IS
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.